RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 OR10A2Q9H208 303 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 PPP1R3EQ9H7J1 279 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 SP140LQ9H930 580 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 PAPOLBQ9NRJ5 636 aaKnown RBP5.54□□□□□ -1.52
PSEN1-216ENST00000556066 CMC2Q9NRP2 79 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 CHCHD3Q9NX63 227 aaKnown RBP5.54□□□□□ -1.52
PSEN1-216ENST00000556066 NDUFA13Q9P0J0 144 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 PDP1Q9P0J1 537 aaPredicted RBP5.54□□□□□ -1.52
PSEN1-216ENST00000556066 ONECUT1Q9UBC0 465 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 RHBDD3Q9Y3P4 386 aa5.54□□□□□ -1.52
PSEN1-216ENST00000556066 A0A0B4J203 849 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 IGHV1-69DA0A0B4J2H0 117 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 hCG_38984A0A1B0GV85 526 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 A0A1B0GW55 424 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 SHISA3A0PJX4 238 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 CCDC160A6NGH7 325 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 ANXA2P2A6NMY6 339 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 PRR23D1E9PI22 279 aaPredicted RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 SELENOFO60613 162 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 GLCEO94923 617 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 KNG1P01042 644 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 LHBP01229 141 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 IGHV1-69P01742 117 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 MELTFP08582 738 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 DUX4L2P0CJ85 424 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 DUX4L3P0CJ86 424 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 DUX4L4P0CJ87 422 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 DUX4L5P0CJ88 424 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 DUX4L6P0CJ89 424 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 DUX4L7P0CJ90 424 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 PRR23D2P0DMB1 279 aaPredicted RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 MMP9P14780 707 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 HOXB6P17509 224 aaKnown RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 CFL1P23528 166 aaKnown RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 OPRL1P41146 370 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 NAA10P41227 235 aaPredicted RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 RAG2P55895 527 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 ISL1P61371 349 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 RPS7P62081 194 aaKnown RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 VAMP2P63027 116 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 PRB3Q04118 309 aaPredicted RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 SRSF4Q08170 494 aaKnown RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 IKZF1Q13422 519 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 PDCD1Q15116 288 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 WDR38Q5JTN6 314 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 PRR31Q5SQ13 230 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 LINC01590Q5TEZ4 76 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 ZNF691Q5VV52 312 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 KDM4DQ6B0I6 523 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 DUX4L9Q6RFH8 374 aaPredicted RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 WDR82Q6UXN9 313 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 Q6YL49 198 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 C17orf107Q6ZR85 190 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 KCTD8Q6ZWB6 473 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 SHFQ7M4L6 423 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 C11orf53Q8IXP5 236 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 C8orf59Q8N0T1 100 aaPredicted RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 FGFRL1Q8N441 504 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 FTMTQ8N4E7 242 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 KIR3DL3Q8N743 410 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 OR1M1Q8NGA1 313 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 OR5T2Q8NGG2 359 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 OR52H1Q8NGJ2 320 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 OR4F5Q8NH21 305 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 PPP1R35Q8TAP8 253 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 RNF133Q8WVZ7 376 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 H1FXQ92522 213 aaKnown RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 SGCDQ92629 289 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 SPSB4Q96A44 273 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 SEH1LQ96EE3 360 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 FAM71F1Q96KD3 344 aaPredicted RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 RDH12Q96NR8 316 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 MICU1Q9BPX6 476 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 YTHDF1Q9BYJ9 559 aaKnown RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 RIBC2Q9H4K1 309 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 CNTD2Q9H8S5 307 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 ZNF556Q9HAH1 456 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 NOX4Q9NPH5 578 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 ACOXLQ9NUZ1 547 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 ZNF319Q9P2F9 582 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 DNAJB11Q9UBS4 358 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 DUX4Q9UBX2 424 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 RPUSD1Q9UJJ7 312 aaKnown RBP5.53□□□□□ -1.52
PSEN1-216ENST00000556066 LAMP5Q9UJQ1 280 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 ORC6Q9Y5N6 252 aa5.53□□□□□ -1.52
PSEN1-216ENST00000556066 A0A0U1RQK1 487 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 ZNF850A8MQ14 1090 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 CDIPTO14735 213 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 TNFRSF13BO14836 293 aaPredicted RBP5.52□□□□□ -1.53
PSEN1-216ENST00000556066 SLC16A6O15403 523 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 NDUFB3O43676 98 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 FCN3O75636 299 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 ECDO95905 644 aaPredicted RBP5.52□□□□□ -1.53
PSEN1-216ENST00000556066 IGHV4-59P01825 116 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 MUC1P15941 1255 aaPredicted RBP5.52□□□□□ -1.53
PSEN1-216ENST00000556066 EPHA2P29317 976 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 IL5RAQ01344 420 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 PRDX4Q13162 271 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 GINS1Q14691 196 aa5.52□□□□□ -1.53
PSEN1-216ENST00000556066 PDLIM3Q53GG5 364 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms