RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 NPTNQ9Y639 398 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 WNK2Q9Y3S1 2297 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 TRAV8-7A0A075B6U6 113 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 TRAV1-2A0A0B4J238 106 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 LOC100506127A0A0U1RQW1 187 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 ISPDA4D126 451 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 SRRM5B3KS81 715 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 TRAPPC2LH3BP13 241 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 LGALS8O00214 317 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 PIN1P1O15428 100 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 NDUFA2O43678 99 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 AIREO43918 545 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 NOS1APO75052 506 aaPredicted RBP6.43□□□□□ -1.38
TDP1-214ENST00000556063 CYB5R3P00387 301 aaPredicted RBP6.43□□□□□ -1.38
TDP1-214ENST00000556063 MUC1P15941 1255 aaPredicted RBP6.43□□□□□ -1.38
TDP1-214ENST00000556063 GLRA1P23415 457 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 MPZP25189 248 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 CALRP27797 417 aaKnown RBP6.43□□□□□ -1.38
TDP1-214ENST00000556063 PMELP40967 661 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 NR4A2P43354 598 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 RPL5P46777 297 aaKnown RBP6.43□□□□□ -1.38
TDP1-214ENST00000556063 BMXP51813 675 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 BTG1P62324 171 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 PDZK1IP1Q13113 114 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 RIN1Q13671 783 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 GPR176Q14439 515 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 MICBQ29980 383 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 SMIM21Q3B7S5 101 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 TMEM155Q4W5P6 130 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 TMEM91Q6ZNR0 172 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 DNM1P46Q6ZS02 220 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 ZNF826PQ6ZT77 177 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 SLC25A26Q70HW3 274 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 ANGPTL5Q86XS5 388 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 FAM90A1Q86YD7 464 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 C11orf53Q8IXP5 236 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 JAGN1Q8N5M9 183 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 POC1AQ8NBT0 407 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 OR52N4Q8NGI2 321 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 OR51A2Q8NGJ7 313 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 OR51F2Q8NH61 342 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 TNFAIP8L1Q8WVP5 186 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 TMIGD2Q96BF3 282 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 RAB39BQ96DA2 213 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 CEP19Q96LK0 163 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 Q96MF0 132 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 KCTD7Q96MP8 289 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 CHCHD6Q9BRQ6 235 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 UQCC2Q9BRT2 126 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 BPESC1Q9GZL8 116 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 FGF23Q9GZV9 251 aaPredicted RBP6.43□□□□□ -1.38
TDP1-214ENST00000556063 METTL17Q9H7H0 456 aaPredicted RBP6.43□□□□□ -1.38
TDP1-214ENST00000556063 ELL3Q9HB65 397 aaPredicted RBP6.43□□□□□ -1.38
TDP1-214ENST00000556063 RHOFQ9HBH0 211 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 DNAJB11Q9UBS4 358 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 PCDHB10Q9UN67 800 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 WIPI2Q9Y4P8 454 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 CACNG2Q9Y698 323 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 CELSR2Q9HCU4 2923 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 CRYBG3Q68DQ2 2970 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 ABCA1O95477 2261 aa6.43□□□□□ -1.38
TDP1-214ENST00000556063 MALRD1Q5VYJ5 2156 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 CSPG4Q6UVK1 2322 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 IGKV1-27A0A075B6S5 117 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 IGHV4-30-2A0A087WSY4 118 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 OOEPA6NGQ2 149 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 VWC2LB2RUY7 222 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 AKR7A2O43488 359 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 SYNGR1O43759 233 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 ZNF780AO75290 641 aaPredicted RBP6.42□□□□□ -1.38
TDP1-214ENST00000556063 RHBDL1O75783 438 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 NXPH2O95156 264 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 PLATP00750 562 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 LHBP01229 141 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 CSTBP04080 98 aaKnown RBP6.42□□□□□ -1.38
TDP1-214ENST00000556063 PGA5P0DJD9 388 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 USF1P22415 310 aaPredicted RBP6.42□□□□□ -1.38
TDP1-214ENST00000556063 GADD45AP24522 165 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 PTGFRP43088 359 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 CAPZA1P52907 286 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 INSL4Q14641 139 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 AVPI1Q5T686 147 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 FAM27D1Q5T7N8 215 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 C22orf42Q6IC83 251 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 ASPHD2Q6ICH7 369 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 NLRC3Q7RTR2 1065 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 TPRA1Q86W33 373 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 LRRC28Q86X40 367 aaPredicted RBP6.42□□□□□ -1.38
TDP1-214ENST00000556063 CALHM1Q8IU99 346 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 GCSAMQ8N6F7 178 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 DEFB108BQ8NET1 73 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 PXT1Q8NFP0 134 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 OR5D18Q8NGL1 313 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 OR13F1Q8NGS4 319 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 RFT1Q96AA3 541 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 C12orf43Q96C57 262 aaKnown RBP6.42□□□□□ -1.38
TDP1-214ENST00000556063 KCTD12Q96CX2 325 aaKnown RBP6.42□□□□□ -1.38
TDP1-214ENST00000556063 ORAI1Q96D31 301 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 YIPF6Q96EC8 236 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 SPACA5Q96QH8 159 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms