RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 NOXO1Q8NFA2 376 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RNASE11Q8TAA1 199 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 FGFBP3Q8TAT2 258 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 NEUROG1Q92886 237 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 SLC25A28Q96A46 364 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 PIK3IP1Q96FE7 263 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ALKBH3Q96Q83 286 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 SSX3Q99909 188 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 VRK1Q99986 396 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RSRP1Q9BUV0 290 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 TMED9Q9BVK6 235 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 TXNIPQ9H3M7 391 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 SEC61A2Q9H9S3 476 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 NRIP3Q9NQ35 241 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 VSX1Q9NZR4 365 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 MED31Q9Y3C7 131 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RNF115Q9Y4L5 304 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RP1L1Q8IWN7 2480 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 HIVEP1P15822 2718 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 TANC2Q9HCD6 1990 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 FXYD6-FXYD2A0A087WZ82 144 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 A0A1W2PPE3 182 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 IRGMA1A4Y4 181 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 SNRPGP15A8MWD9 76 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 TLX2O43763 284 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 KRT33AO76009 404 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 UBL3O95164 117 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 SOX14O95416 240 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 OR8U8P0C7N1 319 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 APEHP13798 732 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RPA2P15927 270 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 MGMTP16455 207 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 PTNP21246 168 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 GALP22466 123 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 AQP2P41181 271 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RBP2P50120 134 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RAB2AP61019 212 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 HIST1H3AP68431 136 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ADAM8P78325 824 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 BLOC1S1P78537 153 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ARF1P84077 181 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 PITPNAQ00169 270 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 POU3F1Q03052 451 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 HGFACQ04756 655 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 PEA15Q15121 130 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 KCNMB1Q16558 191 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 MSMPQ1L6U9 139 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 MESTQ5EB52 335 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RNASE12Q5GAN4 147 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 HIST2H3PS2Q5TEC6 136 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF626Q68DY1 528 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 SFRP4Q6FHJ7 346 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RPL13AP3Q6NVV1 102 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 HIST2H3AQ71DI3 136 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 TMEM200AQ86VY9 491 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF561Q8N587 486 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 HAVCR2Q8TDQ0 301 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 MCHR2Q969V1 340 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 MEGF10Q96KG7 1140 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RHOVQ96L33 236 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF582Q96NG8 517 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ALG12Q9BV10 488 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 EMC6Q9BV81 110 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 FXYD6Q9H0Q3 95 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 TLNRD1Q9H1K6 362 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 CRLF2Q9HC73 371 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 TMEM38BQ9NVV0 291 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RHCGQ9UBD6 479 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 OPN4Q9UHM6 478 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 SLC13A4Q9UKG4 626 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 EXOSC1Q9Y3B2 195 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 CHD3Q12873 2000 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 CR1P17927 2039 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 MCIDASD6RGH6 385 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 H3BN98 237 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 H7C417 338 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 IMPA2O14732 288 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ARPC1BO15143 372 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 TCAPO15273 167 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 PPIHO43447 177 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 GSTZ1O43708 216 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 CREBL2O60519 120 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 IL5P05113 134 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 H1F0P07305 194 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 CELA3BP08861 270 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 CECR9P0C854 216 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 LIMS3P0CW19 117 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 LIMS4P0CW20 117 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RCC1P18754 421 aaPredicted RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 CELP19835 753 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ANXA7P20073 488 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 NFYBP25208 207 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 PPT1P50897 306 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 CCR9P51686 369 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 HCCSP53701 268 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 BIDP55957 195 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 GMFBP60983 142 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 RPL27P61353 136 aaKnown RBP3.37□□□□□ -1.87
LINC00648-202ENST00000555985 KRTAP1-1Q07627 177 aa3.37□□□□□ -1.87
LINC00648-202ENST00000555985 ACSM1Q08AH1 577 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms