RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CCDC163A0A0D9SF12 145 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 MSGN1A6NI15 193 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 E9PLN8 166 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 K7EPK0 472 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 GPR31O00270 319 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 LAMTOR5O43504 91 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 SGCEO43556 437 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 CTSDP07339 412 aaPredicted RBP6.12□□□□□ -1.43
TDP1-213ENST00000555880 FGF5P12034 268 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 PVALBP20472 110 aaPredicted RBP6.12□□□□□ -1.43
TDP1-213ENST00000555880 OTX1P32242 354 aaPredicted RBP6.12□□□□□ -1.43
TDP1-213ENST00000555880 HIST1H3AP68431 136 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 MRPS34P82930 218 aaKnown RBP6.12□□□□□ -1.43
TDP1-213ENST00000555880 PJVKQ0ZLH3 352 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 CHAF1BQ13112 559 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 RAB35Q15286 201 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 ABCA11PQ4W5N1 156 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 DMRTC1Q5HYR2 192 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 HIST2H3PS2Q5TEC6 136 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 H3F3CQ6NXT2 135 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 HIST2H3AQ71DI3 136 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 C6orf201Q7Z4U5 140 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 FOXRED2Q8IWF2 684 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 FAM71E2Q8N5Q1 922 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 OR51F2Q8NH61 342 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 MAFAQ8NHW3 353 aaPredicted RBP6.12□□□□□ -1.43
TDP1-213ENST00000555880 M1APQ8TC57 530 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 ADAMTS17Q8TE56 1095 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 SAP25Q8TEE9 199 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 MR1Q95460 341 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 NABP1Q96AH0 204 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 Q96M66 194 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 ZNF385AQ96PM9 386 aaKnown RBP6.12□□□□□ -1.43
TDP1-213ENST00000555880 MICU1Q9BPX6 476 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 PIGQQ9BRB3 760 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 ZNF2Q9BSG1 426 aaPredicted RBP6.12□□□□□ -1.43
TDP1-213ENST00000555880 SEC11CQ9BY50 192 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 SLC5A7Q9GZV3 580 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 ZNF700Q9H0M5 742 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 NECAP2Q9NVZ3 263 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 MLXQ9UH92 298 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 PADI1Q9ULC6 663 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 CARHSP1Q9Y2V2 147 aaKnown RBP6.12□□□□□ -1.43
TDP1-213ENST00000555880 KCNIP3Q9Y2W7 256 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 PTRH2Q9Y3E5 179 aaKnown RBP6.12□□□□□ -1.43
TDP1-213ENST00000555880 CNTRLQ7Z7A1 2325 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 LY6G6EA0A0G2JKS1 128 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 C5orf63A6NC05 138 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 ZNF850A8MQ14 1090 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 YKT6O15498 198 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 DNPH1O43598 174 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 MED6O75586 246 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 CBR3O75828 277 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 JTBO76095 146 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 ACTL6AO96019 429 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 CST4P01036 141 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 CCL3P10147 92 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 RPS2P15880 293 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 ANOS1P23352 680 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 HOXA6P31267 233 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 PTGER4P35408 488 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 RAC1P63000 192 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 PHYHD1Q5SRE7 291 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 FAM27BQ5VT28 67 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 Q6ZSR3 168 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 TMEM200AQ86VY9 491 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 C20orf196Q8IYI0 205 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 PUSL1Q8N0Z8 303 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 REEP6Q96HR9 211 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 GNRHR2Q96P88 292 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 UCN2Q96RP3 112 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 SF3B5Q9BWJ5 86 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 HRH4Q9H3N8 390 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 ACKR4Q9NPB9 350 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 GPR173Q9NS66 373 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 UQCC1Q9NVA1 299 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 OCIAD1Q9NX40 245 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 ANXA10Q9UJ72 324 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 ZNF391Q9UJN7 358 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 PRELID3BQ9Y3B1 194 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 U3KQA8 63 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 NSG1A0A0A6YYJ2 146 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 FAM230AA0A1W2PPH8 454 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 CRYM-AS1A6NIL9 109 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 G3V3Y1 287 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 TNFSF11O14788 317 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 LRP3O75074 770 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 GAPDHP04406 335 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 CELA2AP08217 269 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 DBHP09172 617 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 CST2P09228 141 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 FAM157CP0CG43 387 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 ZNF728P0DKX0 622 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 OR5H8P0DN80 308 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 COX6A1P12074 109 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 DTYMKP23919 212 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 RPL12P30050 165 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 RBP2P50120 134 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 CAV2P51636 162 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 SUCLG1P53597 346 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms