RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ZNF525Q8N782 197 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 ZNF420Q8TAQ5 688 aaPredicted RBP13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 TIMD4Q96H15 378 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 GPER1Q99527 375 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 BCL7BQ9BQE9 202 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 NPTNQ9Y639 398 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 SETXQ7Z333 2677 aaKnown RBP13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 CCDC168Q8NDH2 2452 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 SRRM5B3KS81 715 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 LHBP01229 141 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 ZP1P60852 638 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 ZNF826PQ6ZT77 177 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 SATL1Q86VE3 508 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 Q8IYB0 196 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 POC1AQ8NBT0 407 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 PXT1Q8NFP0 134 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 FAM168AQ92567 244 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 SPACA5Q96QH8 159 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 CENPOQ9BU64 300 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 CACNG2Q9Y698 323 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 CHD3Q12873 2000 aaKnown RBP13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 TANC2Q9HCD6 1990 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 LYNX1G3V0Z9 82 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 PGA5P0DJD9 388 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 LYNX1P0DP58 116 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 PTGFRP43088 359 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 GPR107Q5VW38 600 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 SLC25A26Q70HW3 274 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 JAGN1Q8N5M9 183 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 GCSAMQ8N6F7 178 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 C10orf105Q8TEF2 133 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 LRRC29Q8WV35 223 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 RAB1CQ92928 201 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 RASL12Q9NYN1 266 aa13.84□□□□□ -0.19
SPTLC2-203ENST00000554901 DYSFO75923 2080 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 CSMD2Q7Z408 3487 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 SYNGR1O43759 233 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 RHBDL1O75783 438 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 TMEM225BP0DP42 221 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 RAB3BP20337 219 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 CFPP27918 469 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 POU3F4P49335 361 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 TMBIM6P55061 237 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 BLMHQ13867 455 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 CLEC12BQ2HXU8 276 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 Q5PR19 223 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 C1orf100Q5SVJ3 147 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 ASCL4Q6XD76 172 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 SLC16A12Q6ZSM3 486 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 FAM90A1Q86YD7 464 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 TGIF2LYQ8IUE0 185 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 OR51F2Q8NH61 342 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 RAB2BQ8WUD1 216 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 TNFAIP8L1Q8WVP5 186 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 CEP19Q96LK0 163 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 NRIP2Q9BQI9 281 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 PIMREGQ9BSJ6 248 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 TREM2Q9NZC2 230 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 GHRLQ9UBU3 117 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 V9GY05 133 aa13.83□□□□□ -0.2
SPTLC2-203ENST00000554901 TRAPPC2LH3BP13 241 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 TMEM127O75204 238 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 ZNF780AO75290 641 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 CYB5R3P00387 301 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 MUC1P15941 1255 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 SLC25A16P16260 332 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 GPR6P46095 362 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 BMXP51813 675 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 ERVK11-1P61568 191 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 KCNJ8Q15842 424 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 CARTPTQ16568 116 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 CTF1Q16619 201 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 OR6M1Q8NGM8 313 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 RFT1Q96AA3 541 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 C12orf43Q96C57 262 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 CNTD2Q9H8S5 307 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 PCDHB16Q9NRJ7 776 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 IL36GQ9NZH8 169 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 MTCH1Q9NZJ7 389 aa13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 AK6Q9Y3D8 172 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-203ENST00000554901 PPIAL4EA0A075B759 164 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 TRAV38-1A0A0B4J264 116 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 SHISA3A0PJX4 238 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 PPIAL4DF5H284 164 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 LGALS8O00214 317 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 PPIHO43447 177 aaKnown RBP13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 KDM4BO94953 1096 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 UBBP0CG47 229 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 PPIAL4FP0DN26 164 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 GLRA1P23415 457 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 SDC2P34741 201 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 ART1P52961 327 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 BTG1P62324 171 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 GPR176Q14439 515 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 TEX36Q5VZQ5 186 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 CLVS1Q8IUQ0 354 aaPredicted RBP13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 MUC20Q8N307 709 aaPredicted RBP13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 Q8NFD4 153 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 OR5D18Q8NGL1 313 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 S100A13Q99584 98 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms