RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 AGTP01019 485 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 KRT6AP02538 564 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 LYNX1P0DP58 116 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ATP1B2P14415 290 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 GABRA1P14867 456 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 HPGDP15428 266 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 BTCP35070 178 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 UGT2B10P36537 528 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CSNK1DP48730 415 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 PRLHRP49683 370 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 SSR4P51571 173 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 SH3BGRP55822 239 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 RPL23AP62750 156 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 ERVK-25P63136 954 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 BSPH1Q075Z2 132 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 MRPL28Q13084 256 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 PDIA2Q13087 525 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 DDX39BQ13838 428 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 RCAN2Q14206 197 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 POU6F1Q14863 301 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 DGUOKQ16854 277 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 PGGHGQ32M88 737 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 C6orf226Q5I0X4 101 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 DEFB121Q5J5C9 76 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 VAX1Q5SQQ9 334 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 RESP18Q5W5W9 173 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 NCBP2-AS2Q69YL0 99 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CYB5R2Q6BCY4 276 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 C6orf89Q6UWU4 347 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 MBOAT1Q6ZNC8 495 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 H2BFWTQ7Z2G1 175 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF546Q86UE3 836 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CTAGE6Q86UF2 777 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 MKXQ8IYA7 352 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 PIANPQ8IYJ0 282 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM61Q8N0U2 210 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OTUD6BQ8N6M0 293 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 APCDD1LQ8NCL9 501 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OR2L3Q8NG85 312 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OR13C2Q8NGS9 318 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OR5K2Q8NHB8 316 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ACOT11Q8WXI4 607 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 NTAN1Q96AB6 310 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 DNAJC1Q96KC8 554 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 PRAP1Q96NZ9 151 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 GSDMAQ96QA5 445 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 PANX2Q96RD6 677 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CNN2Q99439 309 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM246Q9BRR3 403 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 PELOQ9BRX2 385 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 ANGPTL4Q9BY76 406 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ROPN1BQ9BZX4 212 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 ANKRD19PQ9H560 264 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 RANBP3Q9H6Z4 567 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 SIAEQ9HAT2 523 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 MRPS30Q9NP92 439 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 C14orf105Q9NVL8 296 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF629Q9UEG4 869 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF639Q9UID6 485 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF225Q9UK10 706 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF223Q9UK11 482 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 HYOU1Q9Y4L1 999 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 HEBP2Q9Y5Z4 205 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 SLC25A15Q9Y619 301 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 KIAA1109Q2LD37 5005 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 DOCK11Q5JSL3 2073 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 A0A096LNT2 108 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 IGKV1-8A0A0C4DH67 115 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 MDFIC2A0A1B0GVS7 189 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 C12orf71A8MTZ7 269 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 C12orf77C9JDV5 145 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 C9JVG2 144 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 PSMD12O00232 456 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 LYZL6O75951 148 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OR7A10O76100 309 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 RALBP11234 206 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ETS2P15036 469 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 UCHL3P15374 230 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CRISP2P16562 243 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 RCC1P18754 421 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 NCF2P19878 526 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 USF1P22415 310 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 SLC2A5P22732 501 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CRYGSP22914 178 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CCNCP24863 283 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 TEAD1P28347 426 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OPRM1P35372 400 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 HSD17B2P37059 387 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 FDFT1P37268 417 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 SLC26A3P40879 764 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 RFX3P48380 749 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 FBXW4P57775 412 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 LRRC63Q05C16 580 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 STX5Q13190 355 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 UNC119Q13432 240 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 PON3Q15166 354 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CTSL3PQ5NE16 218 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 C9orf135Q5VTT2 229 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ZFAND6Q6FIF0 208 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CTRB2Q6GPI1 263 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms