RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 C2orf80Q0P641 193 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 ADIGQ0VDE8 80 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 FBXO48Q5FWF7 155 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 FAHD1Q6P587 224 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 DEGS2Q6QHC5 323 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 UNQ9165/PRO28630Q6UXU0 137 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 BHLHA15Q7RTS1 189 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-213ENST00000554776 NEGR1Q7Z3B1 354 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 HMGN2P46Q86SG4 172 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 RBM45Q8IUH3 476 aaKnown RBP1.75□□□□□ -2.13
SCFD1-213ENST00000554776 CCNYL1Q8N7R7 359 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 SLC25A29Q8N8R3 303 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 OR2M7Q8NG81 312 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 CLHC1Q8NHS4 586 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 SFXN5Q8TD22 340 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 RTN4IP1Q8WWV3 396 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-213ENST00000554776 CIDECQ96AQ7 238 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-213ENST00000554776 MSANTD3Q96H12 275 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF396Q96N95 335 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-213ENST00000554776 METTL26Q96S19 204 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF2Q9BSG1 426 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-213ENST00000554776 COPS4Q9BT78 406 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 TMED9Q9BVK6 235 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 RAB1BQ9H0U4 201 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 ZSCAN16Q9H4T2 348 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-213ENST00000554776 LINC00574Q9H8X3 128 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 SND1-IT1Q9HBX3 110 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 ACOT13Q9NPJ3 140 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 RWDD2AQ9UIY3 292 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 ELP1O95163 1332 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 IGLV2-18A0A075B6J9 118 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 SLC5A10A0PJK1 596 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 FAM25EA8MYX2 175 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 hCG_2039718K7EN88 272 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 SCO1O75880 301 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 IVLP07476 585 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 SEC11BP0C7V7 166 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF14P17017 642 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-213ENST00000554776 NTF3P20783 257 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 BGNP21810 368 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 PSMB5P28074 263 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 PRSS3P35030 304 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 RANBP1P43487 201 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 STX4Q12846 297 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 GUSBP1Q15486 140 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 C18orf21Q32NC0 220 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-213ENST00000554776 SP6Q3SY56 376 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 ACTL10Q5JWF8 245 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 LIN9Q5TKA1 542 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 ITPRIPQ8IWB1 547 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 BBS7Q8IWZ6 715 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 ORMDL3Q8N138 153 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 CA13Q8N1Q1 262 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 TCAIMQ8N3R3 496 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 RNF182Q8N6D2 247 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 LINC00337Q8N6G1 96 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 OR4K2Q8NGD2 314 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 OR6K2Q8NGY2 324 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 NT5CQ8TCD5 201 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 LGALS14Q8TCE9 139 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 ZFAND1Q8TCF1 268 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 C22orf15Q8WYQ4 148 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 SMARCD1Q96GM5 515 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 CPB2Q96IY4 423 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 SMIM8Q96KF7 97 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 CFAP53Q96M91 514 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF75AQ96N20 296 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 DERL3Q96Q80 235 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 CIB1Q99828 191 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 RHOXF2Q9BQY4 288 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF717Q9BY31 904 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-213ENST00000554776 MRPL20Q9BYC9 149 aaKnown RBP1.74□□□□□ -2.13
SCFD1-213ENST00000554776 ULBP2Q9BZM5 246 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 CSNK1G1Q9HCP0 422 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 RMND1Q9NWS8 449 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 NXT1Q9UKK6 140 aaKnown RBP1.74□□□□□ -2.13
SCFD1-213ENST00000554776 RAB22AQ9UL26 194 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 TFR2Q9UP52 801 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 POFUT2Q9Y2G5 429 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 AP3M1Q9Y2T2 418 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 S4R3C0 116 aa1.74□□□□□ -2.13
SCFD1-213ENST00000554776 COL27A1Q8IZC6 1860 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-213ENST00000554776 TMEM72A0PK05 275 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 CENPBD1B2RD01 187 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 RLN2P04090 185 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 MAS1P04201 325 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 NELFEP18615 380 aaKnown RBP1.73□□□□□ -2.13
SCFD1-213ENST00000554776 PSMB2P49721 201 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 OR12D2P58182 307 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 RPL10AP62906 217 aaKnown RBP1.73□□□□□ -2.13
SCFD1-213ENST00000554776 FUT5Q11128 374 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 STX3Q13277 289 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 FBXL19-AS1Q494R0 122 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 CDNFQ49AH0 187 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 ACTBL2Q562R1 376 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 SYT6Q5T7P8 510 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-213ENST00000554776 FAM222AQ5U5X8 452 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 MED27Q6P2C8 311 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 CLEC19AQ6UXS0 136 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 FAM19A1Q7Z5A9 133 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms