RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 RAC1P63000 192 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 IAH1Q2TAA2 248 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 SP6Q3SY56 376 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 CLEC9AQ6UXN8 241 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 SULF2Q8IWU5 870 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 OR2Y1Q8NGV0 311 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 GHRLQ9UBU3 117 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 IGKV1-27A0A075B6S5 117 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 CBR3O75828 277 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 RPS2P15880 293 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 ZNF32P17041 273 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 PRKACAP17612 351 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 RGS19P49795 217 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 GUCA2BQ16661 112 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 PIGYQ3MUY2 71 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 WIPI1Q5MNZ9 446 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 EMG1Q92979 244 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 LSM5Q9Y4Y9 91 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 PCDHGA1Q9Y5H4 931 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 IFNA2P01563 188 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 P04436 131 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 MLF1P58340 268 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 M1APQ8TC57 530 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 AK3Q9UIJ7 227 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 FAM96BQ9Y3D0 163 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 F8VVB4 439 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 F8VWA3 439 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 TOR1AO14656 332 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 MSTNO14793 375 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 AGPAT2O15120 278 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 FBXO24O75426 580 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 RFC3P40938 356 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 TSPO2Q5TGU0 170 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 C9orf135Q5VTT2 229 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 CDCP2Q5VXM1 449 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 RPL7L1Q6DKI1 246 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 OR2A2Q6IF42 318 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 RPUSD3Q6P087 351 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 POC1AQ8NBT0 407 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 FGFBP3Q8TAT2 258 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 RNF141Q8WVD5 230 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 METTL9Q9H1A3 318 aa13.67□□□□□ -0.22
ARHGEF40-203ENST00000554514 FIGNL2A6NMB9 653 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 CEACAM18A8MTB9 384 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 F8W036 122 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 OTX1P32242 354 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 SUCLG1P53597 346 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 BLOC1S1P78537 153 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 FAM27BQ5VT28 67 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 AAED1Q7RTV5 226 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 GPR137CQ8N3F9 429 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 STOML3Q8TAV4 291 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 BORCS8Q96FH0 119 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 Q96M66 194 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 CMSS1Q9BQ75 279 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 TM2D1Q9BX74 207 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 TRBV6-7A0A0A0MS04 114 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 TMEM218A2RU14 115 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 PMS2P1A4D2B8 440 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 GEMIN2O14893 280 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 OR5H8P0DN80 308 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 ADCYAP1P18509 176 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 NME2P22392 152 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 RBM39Q14498 530 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 TRIM61Q5EBN2 209 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 SLC16A14Q7RTX9 510 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 SLC30A7Q8NEW0 376 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 OR1F12Q8NHA8 337 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 ARL11Q969Q4 196 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 PARP12Q9H0J9 701 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 LIME1Q9H400 295 aa13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-203ENST00000554514 ATG12O94817 140 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 HIST1H3AP68431 136 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 MRPS34P82930 218 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 CEACAM16Q2WEN9 425 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 PHLDA2Q53GA4 152 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 HIST2H3PS2Q5TEC6 136 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 HIST2H3AQ71DI3 136 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 SGPP2Q8IWX5 399 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 MRPL24Q96A35 216 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 ZNF845Q96IR2 970 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 SULT4A1Q9BR01 284 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 PADI1Q9ULC6 663 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 NCKAP5O14513 1909 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 AHCTF1Q8WYP5 2266 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 SYNGR3O43761 229 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 LRP3O75074 770 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 APOC1P02654 83 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 CCNOP22674 350 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 ALDH3B1P43353 468 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 RAB35Q15286 201 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 FOXL2NBQ6ZUU3 175 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 PUSL1Q8N0Z8 303 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 FNDC9Q8TBE3 224 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 PIGCQ92535 297 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 C1orf123Q9NWV4 160 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 ANXA10Q9UJ72 324 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 LHX6Q9UPM6 363 aa13.65□□□□□ -0.22
ARHGEF40-203ENST00000554514 FGF16O43320 207 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms