RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TNFSF4P23510 183 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 CD200P41217 278 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 GATA4P43694 442 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 PPP5CP53041 499 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 UNC119Q13432 240 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 RSU1Q15404 277 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 SLC22A6Q4U2R8 563 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 DMRTC1Q5HYR2 192 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 ELP2Q6IA86 826 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 CLEC18BQ6UXF7 455 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 RNF144BQ7Z419 303 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 LRP11Q86VZ4 500 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 CALHM1Q8IU99 346 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 Q8IYB0 196 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 CMTM4Q8IZR5 234 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 PIP4P2Q8N4L2 257 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 CLEC18CQ8NCF0 446 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 OR10AD1Q8NGE0 317 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 OR5D18Q8NGL1 313 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 OR51F2Q8NH61 342 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 DVL3Q92997 716 aaPredicted RBP6.51□□□□□ -1.37
TDP1-209ENST00000554180 RFT1Q96AA3 541 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 PHF21AQ96BD5 680 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 PIK3IP1Q96FE7 263 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 NKX3-1Q99801 234 aaPredicted RBP6.51□□□□□ -1.37
TDP1-209ENST00000554180 SPOCK3Q9BQ16 436 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 SOSTQ9BQB4 213 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 URM1Q9BTM9 101 aaKnown RBP6.51□□□□□ -1.37
TDP1-209ENST00000554180 CCDC32Q9BV29 185 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 MSL2Q9HCI7 577 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 DIABLOQ9NR28 239 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 FAIMQ9NVQ4 179 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 TAAR3PQ9P1P4 343 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 MYEF2Q9P2K5 600 aaKnown RBP6.51□□□□□ -1.37
TDP1-209ENST00000554180 EXTL2Q9UBQ6 330 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 COL12A1Q99715 3063 aa6.51□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A10PA6NDY2 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A18PA6NE21 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A16PA6NEW6 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FABP12A6NFH5 140 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A20PA6NIJ5 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 ZSCAN5BA6NJL1 495 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A8PA6NJQ4 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A7PA6NKC0 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A22PA8MWA6 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A12PA8MX19 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A5PA8MXJ8 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A23PA8MXZ1 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 TRAPPC2LH3BP13 241 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 H3BUI4 141 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 C19orf84I3L1E1 186 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 TPD52L2O43399 206 aaKnown RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 XRCC3O43542 346 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 SPRY1O43609 319 aaPredicted RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 CDC14BO60729 498 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 NOS1APO75052 506 aaPredicted RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 CRTAPO75718 401 aaPredicted RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 CSTBP04080 98 aaKnown RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 CHRM2P08172 466 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 CD55P08174 381 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A15PP0C7V4 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A13PP0C7W8 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A14PP0C7W9 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A24PP0C7X0 464 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 MGMTP16455 207 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 CPT2P23786 658 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 CFHR2P36980 270 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 PITPNBP48739 271 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 SRP9P49458 86 aaKnown RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 ZNF81P51508 661 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 EFNB2P52799 333 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 RPS27AP62979 156 aaKnown RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 MRPS10P82664 201 aaKnown RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 PITPNAQ00169 270 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 ZNF154Q13106 437 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 MAB21L1Q13394 359 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 IL18Q14116 193 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 PCGF3Q3KNV8 242 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 NHLRC3Q5JS37 347 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM209AQ5JX71 171 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 TMEM69Q5SWH9 247 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 PYHIN1Q6K0P9 492 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 HAGHLQ6PII5 290 aaPredicted RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM131AQ6UXB0 335 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 MEX3BQ6ZN04 569 aaKnown RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 SLC25A26Q70HW3 274 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 C1QL2Q7Z5L3 287 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 WDR86Q86TI4 376 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 GDPD1Q8N9F7 314 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 OR2Z1Q8NG97 314 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 OR4M1Q8NGD0 313 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 OR56B1Q8NGI3 324 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 LILRB1Q8NHL6 650 aaPredicted RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 ZFAND2BQ8WV99 257 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 AQP3Q92482 292 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 BORCS5Q969J3 196 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FBXW5Q969U6 566 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 ERGIC1Q969X5 290 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 FAM46BQ96A09 425 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 ELMOD3Q96FG2 381 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms