RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CCL3L1P16619 93 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 GSTM3P21266 225 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 TNFSF4P23510 183 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 GABRA5P31644 462 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 OTX1P32242 354 aaPredicted RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 DCTDP32321 178 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 TGFBR2P37173 567 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 RBM34P42696 430 aaKnown RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 SRP9P49458 86 aaKnown RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CEBPDP49716 269 aaPredicted RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 DAP3P51398 398 aaKnown RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 ARHGDIAP52565 204 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 DLX6P56179 175 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 TAS2R41P59536 307 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 BPIFB3P59826 476 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 GMFBP60983 142 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 NCALDP61601 193 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 LSM6P62312 80 aaKnown RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 SF3A3Q12874 501 aaKnown RBP eCLIP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 AQP6Q13520 282 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 PMS2P11Q13670 270 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 RBM39Q14498 530 aaKnown RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF273Q14593 569 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 DEFB121Q5J5C9 76 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 FAM209BQ5JX69 171 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CASC10Q5T4H9 136 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 STUMQ69YW2 141 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 NANOGP8Q6NSW7 305 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CGB2Q6NT52 195 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 PGBD2Q6P3X8 592 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 DHDDSQ86SQ9 333 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 SNX32Q86XE0 403 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 TMEM219Q86XT9 240 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 FAM185AQ8N0U4 392 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CNPY4Q8N129 248 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 BATF2Q8N1L9 274 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 DPP10Q8N608 796 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 FAM86B1Q8N7N1 296 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 SCCPDHQ8NBX0 429 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 C11orf65Q8NCR3 313 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 NPEPL1Q8NDH3 523 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 MNS1Q8NEH6 495 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 SLC26A10Q8NG04 563 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 OR1M1Q8NGA1 313 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 OR56B2PQ8NGI1 322 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 ANGPTL6Q8NI99 470 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 LRRC29Q8WV35 223 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 HPSE2Q8WWQ2 592 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 ST8SIA4Q92187 359 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 SGCDQ92629 289 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 RPL3LQ92901 407 aaKnown RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 BPIFA2Q96DR5 249 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 MPP4Q96JB8 637 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF582Q96NG8 517 aaPredicted RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 RBP7Q96R05 134 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 NMNAT3Q96T66 252 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 AMELYQ99218 206 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 COQ7Q99807 217 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 ASCL2Q99929 193 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 B9D2Q9BPU9 175 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 PARD6BQ9BYG5 372 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 TRIM15Q9C019 465 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 MMADHCQ9H3L0 296 aaPredicted RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 MUC13Q9H3R2 512 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 ARMC7Q9H6L4 198 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 RMND5AQ9H871 391 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 SDF2L1Q9HCN8 221 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 C19orf12Q9NSK7 152 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CMTM6Q9NX76 183 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 THUMPD1Q9NXG2 353 aaKnown RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 TAS2R1Q9NYW7 299 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 ERVK-18Q9QC07 812 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CYB5R1Q9UHQ9 305 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF222Q9UK12 451 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 MED31Q9Y3C7 131 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 LSM4Q9Y4Z0 139 aaKnown RBP2.49□□□□□ -2.01
SLIRP-202ENST00000553981 IER3IP1Q9Y5U9 82 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 KPTNQ9Y664 436 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 DSCAML1Q8TD84 2053 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 KMT2AQ03164 3969 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 IGKV1D-17A0A075B6S4 117 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TRBV4-1A0A0J9YWV2 114 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 hCG_38984A0A1B0GV85 526 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ELOVL7A1L3X0 281 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 MEIOCA2RUB1 952 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 PRORSD1PA6NEY8 169 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TVP23AA6NH52 213 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 SAC3D1A6NKF1 404 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TRPC5OSA6NMA1 111 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 C12orf71A8MTZ7 269 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 EFCAB9A8MZ26 197 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 PRR32B1ATL7 298 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 BMPR1BO00238 502 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 CDIPTO14735 213 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 RGS16O15492 202 aaPredicted RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 AKR7A2O43488 359 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 SYNGR1O43759 233 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 KHDRBS3O75525 346 aaKnown RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 SERPINB7O75635 380 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TXNDC12O95881 172 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms