RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ACBD4Q8NC06 268 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 DTD1Q8TEA8 209 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 SAP25Q8TEE9 199 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 ROBO4Q8WZ75 1007 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 C2orf50Q96LR7 162 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 ZPBPQ9BS86 351 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 OCIAD1Q9NX40 245 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 KLRF1Q9NZS2 232 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 RHBDD3Q9Y3P4 386 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 COL6A3P12111 3177 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 LOC107986453A0A1B0GWG9 222 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 A6NIZ1 184 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 ETV2O00321 342 aaPredicted RBP10.77□□□□□ -0.68
SHMT2-207ENST00000553837 SFT2D2O95562 160 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 KLK2P20151 261 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 ANOS1P23352 680 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 ID4P47928 161 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 BIDP55957 195 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 RAP1BP61224 184 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 RAP1AP62834 184 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 FAM3AP98173 230 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 SPOCK1Q08629 439 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 GAGE1Q13065 139 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 MYBPHQ13203 477 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 PLPPR5Q32ZL2 321 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 C1orf100Q5SVJ3 147 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 TMEM268Q5VZI3 342 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 HEPN1Q6WQI6 88 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 SPNS3Q6ZMD2 512 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 Q7L0L9 218 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 JAGN1Q8N5M9 183 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 CHST4Q8NCG5 386 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 ZNF248Q8NDW4 579 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 OR9K2Q8NGE7 335 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 OR10S1Q8NGN2 331 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 OR2I1PQ8NGU4 316 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 TERB2Q8NHR7 220 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 MAFIPQ8WZ33 124 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 NKD1Q969G9 470 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 SLC25A44Q96H78 314 aaPredicted RBP10.77□□□□□ -0.68
SHMT2-207ENST00000553837 PIGQQ9BRB3 760 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 EIF5A2Q9GZV4 153 aaKnown RBP10.77□□□□□ -0.68
SHMT2-207ENST00000553837 SLC26A1Q9H2B4 701 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 METTL8Q9H825 291 aaKnown RBP10.77□□□□□ -0.68
SHMT2-207ENST00000553837 GDF2Q9UK05 429 aaPredicted RBP10.77□□□□□ -0.68
SHMT2-207ENST00000553837 OR52A1Q9UKL2 312 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 RARRES3Q9UL19 164 aa10.77□□□□□ -0.68
SHMT2-207ENST00000553837 PHF3Q92576 2039 aaKnown RBP10.77□□□□□ -0.68
SHMT2-207ENST00000553837 IFITM10A6NMD0 228 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 UMAD1C9J7I0 102 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 P2RY10O00398 339 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 ADAP1O75689 374 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 DKK1O94907 266 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 OR2C1O95371 312 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 GAPDHP04406 335 aaKnown RBP10.77□□□□□ -0.69
SHMT2-207ENST00000553837 PNLIPP16233 465 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 ZNF823P16415 610 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 MSX1P28360 303 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 UCP2P55851 309 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 SUMO3P55854 103 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-207ENST00000553837 NDUFA6P56556 154 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 RPP30P78346 268 aaKnown RBP10.77□□□□□ -0.69
SHMT2-207ENST00000553837 RAB32Q13637 225 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 LYPD6Q86Y78 171 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 BHLHE23Q8NDY6 225 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 C11orf40Q8WZ69 217 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 FAM46BQ96A09 425 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 C5orf34Q96MH7 638 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 NOL4LQ96MY1 436 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-207ENST00000553837 SERINC1Q9NRX5 453 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 CENPMQ9NSP4 180 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 FAM212BQ9NTI7 297 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-207ENST00000553837 MYOTQ9UBF9 498 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 MEMO1Q9Y316 297 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 SIT1Q9Y3P8 196 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 FLVCR1Q9Y5Y0 555 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 B3GALT1Q9Y5Z6 326 aa10.77□□□□□ -0.69
SHMT2-207ENST00000553837 TMEM269A0A1B0GVZ9 245 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 A0A1W2PPE2 198 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 SEC14L6B5MCN3 397 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 RAB27BO00194 218 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 RAMP1O60894 148 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 PMP2P02689 132 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 CELA2AP08217 269 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 RPS10P46783 165 aaKnown RBP10.76□□□□□ -0.69
SHMT2-207ENST00000553837 DNASE1L1P49184 302 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 DAP3P51398 398 aaKnown RBP10.76□□□□□ -0.69
SHMT2-207ENST00000553837 MFAP5Q13361 173 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 LYSMD4Q5XG99 296 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 RALGAPA1Q6GYQ0 2036 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 CLEC18BQ6UXF7 455 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 UBAC2Q8NBM4 344 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 OR13C3Q8NGS6 347 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 DDIT4LQ96D03 193 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 SCGB3A2Q96PL1 93 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 KCNJ16Q9NPI9 418 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 PLA2G2EQ9NZK7 142 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 KLHL13Q9P2N7 655 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 A0A1W2PNR3 127 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 WIPF3A6NGB9 483 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms