RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 IDNKQ5T6J7 187 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 DNM1P34Q6PK57 102 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 Q6ZSR9 355 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 SEM1Q6ZVN7 128 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 SLC35E3Q7Z769 313 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 SMIM20Q8N5G0 67 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 OR52B4Q8NGK2 314 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 OR13C8Q8NGS7 320 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 ASB10Q8WXI3 467 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 NICN1Q9BSH3 213 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 FAM234AQ9H0X4 552 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 CDIP1Q9H305 208 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 MAGIXQ9H6Y5 334 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 SEMA4GQ9NTN9 838 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 ABI3Q9P2A4 366 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 PSORS1C1Q9UIG5 152 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 LSM7Q9UK45 103 aaKnown RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 ZNF337Q9Y3M9 751 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 TICRRQ7Z2Z1 1910 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 LAMA3Q16787 3333 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 LOC105371242A0A075B767 164 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 FAM183AA6NL82 134 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 UPK1AO00322 258 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 DCTN6O00399 190 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 MPIG6BO95866 241 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 GCGP01275 180 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 OTX1P32242 354 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 CDAP32320 146 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 DUSP3P51452 185 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 ELLP55199 621 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 DLX5P56178 289 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 OR10A3P58181 314 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 MTPNP58546 118 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 POLR2LP62875 67 aaKnown RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 CRMP1Q14194 572 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 GABRA6Q16445 453 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 TMEM255AQ5JRV8 349 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 UNQ6126/PRO20091Q6UXV3 157 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 Q6ZN92 141 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 GDPGP1Q6ZNW5 385 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 TSEN54Q7Z6J9 526 aaKnown RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 SIAH3Q8IW03 269 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 OR8I2Q8N0Y5 310 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 CLDN22Q8N7P3 220 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 ZSCAN4Q8NAM6 433 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 OR52P1PQ8NH57 321 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HOXB13Q92826 284 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 ARHGDIGQ99819 225 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 MICU1Q9BPX6 476 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 SPATA25Q9BR10 227 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 GTSF1LQ9H1H1 148 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HHATLQ9HCP6 504 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 CA10Q9NS85 328 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 CNOT2Q9NZN8 540 aaKnown RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 OR1A2Q9Y585 309 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 COL27A1Q8IZC6 1860 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 TRANK1O15050 2925 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 ZFC3H1O60293 1989 aaKnown RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST1H2BKO60814 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 PRAF2O60831 178 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 TBL1XO60907 577 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 IL18BPO95998 194 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HPRT1P00492 218 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST1H2BJP06899 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 TDGF1P13385 188 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 AMD1P17707 334 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST1H2BOP23527 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 MPZP25189 248 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 CD70P32970 193 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST1H2BBP33778 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 BDKRB1P46663 353 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 WNT4P56705 351 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST1H2BDP58876 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST1H2BCP62807 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 ZNF415Q09FC8 603 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HYAL1Q12794 435 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST2H2BEQ16778 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 SNAI3Q3KNW1 292 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 ATP6AP1LQ52LC2 224 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 OR4A47Q6IF82 309 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 WDR53Q7Z5U6 358 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 SERPINA11Q86U17 422 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 MMD2Q8IY49 270 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 ZNF440Q8IYI8 595 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 ZNF615Q8N8J6 731 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 OR1N2Q8NGR9 330 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 OR13C4Q8NGS5 318 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 SMAP2Q8WU79 429 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 SUSD6Q92537 303 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST1H2BHQ93079 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 PHYHIPLQ96FC7 376 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 SIGLEC11Q96RL6 698 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST1H2BNQ99877 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 HIST1H2BMQ99879 126 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 TEX101Q9BY14 249 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 RETNQ9HD89 108 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 THAP10Q9P2Z0 257 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 RHCGQ9UBD6 479 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 WDR45Q9Y484 360 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms