RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 CALHM1Q8IU99 346 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 OR13C9Q8NGT0 318 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 MYDGFQ969H8 173 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 SMIM19Q96E16 107 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 CCL13Q99616 98 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 MMP26Q9NRE1 261 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 PAK1IP1Q9NWT1 392 aaPredicted RBP19.01■□□□□ 0.63
TDP1-206ENST00000553569 RAB26Q9ULW5 256 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 POLDIP2Q9Y2S7 368 aa19.01■□□□□ 0.63
TDP1-206ENST00000553569 IGKV1-27A0A075B6S5 117 aa19■□□□□ 0.63
TDP1-206ENST00000553569 IGKV1-9A0A0C4DH69 117 aa19■□□□□ 0.63
TDP1-206ENST00000553569 PNMA8CA0A1B0GUJ8 204 aa19■□□□□ 0.63
TDP1-206ENST00000553569 A0A1B0GW55 424 aa19■□□□□ 0.63
TDP1-206ENST00000553569 TRAPPC2LH3BP13 241 aa19■□□□□ 0.63
TDP1-206ENST00000553569 TNFRSF13BO14836 293 aaPredicted RBP19■□□□□ 0.63
TDP1-206ENST00000553569 TMPRSS2O15393 492 aa19■□□□□ 0.63
TDP1-206ENST00000553569 OGG1O15527 345 aa19■□□□□ 0.63
TDP1-206ENST00000553569 TFF1P04155 84 aa19■□□□□ 0.63
TDP1-206ENST00000553569 RPSAP08865 295 aaKnown RBP19■□□□□ 0.63
TDP1-206ENST00000553569 DUX4L2P0CJ85 424 aa19■□□□□ 0.63
TDP1-206ENST00000553569 DUX4L3P0CJ86 424 aa19■□□□□ 0.63
TDP1-206ENST00000553569 DUX4L4P0CJ87 422 aa19■□□□□ 0.63
TDP1-206ENST00000553569 DUX4L5P0CJ88 424 aa19■□□□□ 0.63
TDP1-206ENST00000553569 DUX4L6P0CJ89 424 aa19■□□□□ 0.63
TDP1-206ENST00000553569 DUX4L7P0CJ90 424 aa19■□□□□ 0.63
TDP1-206ENST00000553569 AZGP1P25311 298 aaKnown RBP19■□□□□ 0.63
TDP1-206ENST00000553569 SOX2P48431 317 aa19■□□□□ 0.63
TDP1-206ENST00000553569 WNT4P56705 351 aa19■□□□□ 0.63
TDP1-206ENST00000553569 WDR25Q64LD2 544 aaPredicted RBP19■□□□□ 0.63
TDP1-206ENST00000553569 STUMQ69YW2 141 aa19■□□□□ 0.63
TDP1-206ENST00000553569 DUX4L9Q6RFH8 374 aaPredicted RBP19■□□□□ 0.63
TDP1-206ENST00000553569 ZNF841Q6ZN19 808 aa19■□□□□ 0.63
TDP1-206ENST00000553569 POC1AQ8NBT0 407 aa19■□□□□ 0.63
TDP1-206ENST00000553569 ZNF485Q8NCK3 441 aa19■□□□□ 0.63
TDP1-206ENST00000553569 RPS4Y2Q8TD47 263 aa19■□□□□ 0.63
TDP1-206ENST00000553569 TMIGD2Q96BF3 282 aa19■□□□□ 0.63
TDP1-206ENST00000553569 C12orf43Q96C57 262 aaKnown RBP19■□□□□ 0.63
TDP1-206ENST00000553569 RASSF4Q9H2L5 321 aa19■□□□□ 0.63
TDP1-206ENST00000553569 SMURF1Q9HCE7 757 aa19■□□□□ 0.63
TDP1-206ENST00000553569 NLKQ9UBE8 527 aa19■□□□□ 0.63
TDP1-206ENST00000553569 DUX4Q9UBX2 424 aa19■□□□□ 0.63
TDP1-206ENST00000553569 ERGIC3Q9Y282 383 aa19■□□□□ 0.63
TDP1-206ENST00000553569 TPRKBQ9Y3C4 175 aa19■□□□□ 0.63
TDP1-206ENST00000553569 ZFHX3Q15911 3703 aa19■□□□□ 0.63
TDP1-206ENST00000553569 NKX6-3A6NJ46 265 aa18.99■□□□□ 0.63
TDP1-206ENST00000553569 PGA5P0DJD9 388 aa18.99■□□□□ 0.63
TDP1-206ENST00000553569 SRD5A1P18405 259 aa18.99■□□□□ 0.63
TDP1-206ENST00000553569 SRP14P37108 136 aaKnown RBP18.99■□□□□ 0.63
TDP1-206ENST00000553569 FAM216BQ8N7L0 139 aa18.99■□□□□ 0.63
TDP1-206ENST00000553569 GPR148Q8TDV2 347 aa18.99■□□□□ 0.63
TDP1-206ENST00000553569 TMPRSS13Q9BYE2 586 aa18.99■□□□□ 0.63
TDP1-206ENST00000553569 PKIBQ9C010 78 aa18.99■□□□□ 0.63
TDP1-206ENST00000553569 POLR3KQ9Y2Y1 108 aaPredicted RBP18.99■□□□□ 0.63
TDP1-206ENST00000553569 PCDHGB5Q9Y5G0 923 aa18.99■□□□□ 0.63
TDP1-206ENST00000553569 INMTO95050 263 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 PRKACBP22694 351 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 GATA3P23771 443 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 MPZP25189 248 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 POU3F4P49335 361 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 ATP1B3P54709 279 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 TAS2R43P59537 309 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 SLC35A2P78381 396 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 DOC2BQ14184 412 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 DMKNQ6E0U4 476 aaPredicted RBP18.98■□□□□ 0.63
TDP1-206ENST00000553569 SLC36A1Q7Z2H8 476 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 NANOGP1Q8N7R0 232 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 OR13C5Q8NGS8 318 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 SPSB1Q96BD6 273 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 OPALINQ96PE5 141 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 ZNF184Q99676 751 aaPredicted RBP18.98■□□□□ 0.63
TDP1-206ENST00000553569 MND1Q9BWT6 205 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 ZCCHC4Q9H5U6 513 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 C7orf69Q9H7B7 122 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 ZNF281Q9Y2X9 895 aa18.98■□□□□ 0.63
TDP1-206ENST00000553569 NAV3Q8IVL0 2385 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 LOC105371242A0A075B767 164 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 PPIAL4CA0A0B4J2A2 164 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 OR2AT4A6NND4 320 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 J3QLI3 93 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 NXPH2O95156 264 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 AVPP01185 164 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 FAM157CP0CG43 387 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 RBP2P50120 134 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 NPY4RP50391 375 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 MTCP1P56278 107 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 IL24Q13007 206 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 IKZF1Q13422 519 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 SMIM21Q3B7S5 101 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 ACP7Q6ZNF0 438 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 LHFPL2Q6ZUX7 228 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 SERPINA12Q8IW75 414 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 FGFRL1Q8N441 504 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 DNAAF1Q8NEP3 725 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 ST8SIA4Q92187 359 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 GHSRQ92847 366 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 SLAMF9Q96A28 289 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 RFT1Q96AA3 541 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 SPACA5Q96QH8 159 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 KAAG1Q9UBP8 84 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 INSIG2Q9Y5U4 225 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms