RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 PRSS41Q7RTY9 318 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 KLHDC1Q8N7A1 406 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF17P17021 662 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF32P17041 273 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 CTGFP29279 349 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 PMP22Q01453 160 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 FZD5Q13467 585 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 MICBQ29980 383 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 OR8D4Q8NGM9 314 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 ZDHHC11Q9H8X9 412 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 FKBP11Q9NYL4 201 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 MPC1Q9Y5U8 109 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 POMT1Q9Y6A1 747 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 TTC3P53804 2025 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF320A2RRD8 509 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 M0R1X1 148 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 MT-CO3P00414 261 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 PPP1CBP62140 327 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 LSM6P62312 80 aaKnown RBP10.27□□□□□ -0.76
SYNE2-208ENST00000553289 YBX1P67809 324 aaKnown RBP10.27□□□□□ -0.76
SYNE2-208ENST00000553289 TRILQ7L0X0 811 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 TMPRSS5Q9H3S3 457 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 BARX1Q9HBU1 254 aaPredicted RBP10.27□□□□□ -0.76
SYNE2-208ENST00000553289 GLRX2Q9NS18 164 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 ARID1BQ8NFD5 2236 aaPredicted RBP10.27□□□□□ -0.76
SYNE2-208ENST00000553289 TRGV8A0A0C4DH27 118 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 C3orf85A0A1B0GTC6 90 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 DBX1A6NMT0 343 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 SHISA8B8ZZ34 492 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 CST7O76096 145 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 ATP6V1FQ16864 119 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 PABPC1L2AQ5JQF8 200 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 BTLAQ7Z6A9 289 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF429Q86V71 674 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 C17orf47Q8NEP4 570 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 ASB10Q8WXI3 467 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 FAM122AQ96E09 287 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 MFRPQ9BY79 579 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 UCK1Q9HA47 277 aa10.27□□□□□ -0.76
SYNE2-208ENST00000553289 MARF1Q9Y4F3 1742 aaKnown RBP10.27□□□□□ -0.76
SYNE2-208ENST00000553289 A0A1W2PPQ1 181 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 CDC42EP2O14613 210 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 FGF2P09038 288 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 NTF3P20783 257 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 MEOX1P50221 254 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 ZNF770Q6IQ21 691 aaPredicted RBP10.27□□□□□ -0.77
SYNE2-208ENST00000553289 PRSS42Q7Z5A4 293 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 OR10V1Q8NGI7 309 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 OR5D13Q8NGL4 314 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 GNRHR2Q96P88 292 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 HES4Q9HCC6 221 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 CLEC1BQ9P126 229 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 LSM2Q9Y333 95 aaKnown RBP10.27□□□□□ -0.77
SYNE2-208ENST00000553289 TNFSF14O43557 240 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 MPC2O95563 127 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 MIDNQ504T8 468 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 PDZD11Q5EBL8 140 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 SPATA46Q5T0L3 261 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 OR2T2Q6IF00 324 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 SLC24A4Q8NFF2 622 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 CMBLQ96DG6 245 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 AKR1E2Q96JD6 320 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 CTLA4P16410 223 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 LIMK1P53667 647 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 TPPP2P59282 170 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 RAC3P60763 192 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 C19orf35Q6ZS72 473 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 MRGPREQ86SM8 312 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 ATG4DQ86TL0 474 aaPredicted RBP10.27□□□□□ -0.77
SYNE2-208ENST00000553289 NHLRC2Q8NBF2 726 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 UBAC2Q8NBM4 344 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 OR10D3Q8NH80 312 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 OR2T6Q8NHC8 308 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 GPR137Q96N19 417 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 ICAM5Q9UMF0 924 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 ZNF835Q9Y2P0 537 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 CCL27Q9Y4X3 112 aa10.27□□□□□ -0.77
SYNE2-208ENST00000553289 M0QZ24 198 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 CT62P0C5K7 136 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 COL9A1P20849 921 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 SLC6A1P30531 599 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 CEACAM6P40199 344 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 MOGAT2Q3SYC2 334 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 ZNF774Q6NX45 483 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 TMEM92Q6UXU6 159 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 GFRALQ6UXV0 394 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 VSTM2LQ96N03 204 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 ZNF426Q9BUY5 554 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 CTSDP07339 412 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-208ENST00000553289 OR2Z1Q8NG97 314 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 CNTD2Q9H8S5 307 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 MRM2Q9UI43 246 aaKnown RBP10.26□□□□□ -0.77
SYNE2-208ENST00000553289 MBTPS2O43462 519 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 TXNDC12O95881 172 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 INHBBP09529 407 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 MYF5P13349 255 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 BMI1P35226 326 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 GNB2P62879 340 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 SUMO1P63165 101 aaKnown RBP10.26□□□□□ -0.77
SYNE2-208ENST00000553289 SLC38A11Q08AI6 406 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms