RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 MND1Q9BWT6 205 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 CDCA4Q9BXL8 241 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 PKIBQ9C010 78 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 Q9H521 79 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 KAAG1Q9UBP8 84 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 OR5V1Q9UGF6 321 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 DHDHQ9UQ10 334 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 ERGIC3Q9Y282 383 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 TPRKBQ9Y3C4 175 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 SVEP1Q4LDE5 3571 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 JMJD1CQ15652 2540 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 FAM230AA0A1W2PPH8 454 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 J3QLI3 93 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 TNFRSF13BO14836 293 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 AKR7A2O43488 359 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 MT-ND2P03891 347 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 PGA5P0DJD9 388 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 PRKACBP22694 351 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 CRHBPP24387 322 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 GNB2P62879 340 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 IL24Q13007 206 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 CR1LQ2VPA4 569 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 SMIM21Q3B7S5 101 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 CHRFAM7AQ494W8 412 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 FAM120AOSQ5T036 256 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 LHFPL2Q6ZUX7 228 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 NANOGP1Q8N7R0 232 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 DEFB108BQ8NET1 73 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 ZNF671Q8TAW3 534 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 GATAD2BQ8WXI9 593 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 BORCS8Q96FH0 119 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 PGLYRP3Q96LB9 341 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 OPALINQ96PE5 141 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 SHARPINQ9H0F6 387 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 DNTTIP1Q9H147 329 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 CTSZQ9UBR2 303 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 DNAJB11Q9UBS4 358 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 BLOC1S6Q9UL45 172 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 ZNF281Q9Y2X9 895 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 PCDHGB5Q9Y5G0 923 aa9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 SIRT4Q9Y6E7 314 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-209ENST00000552896 IGKV1-27A0A075B6S5 117 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 IGHV3OR15-7A0A075B7D8 119 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 IGKV1-9A0A0C4DH69 117 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 NKX6-3A6NJ46 265 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 PTGES3LE9PB15 166 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 ADAM20O43506 726 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 RGS10O43665 173 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 SULT1B1O43704 296 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 SYNGR1O43759 233 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 NOS1APO75052 506 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 ALX3O95076 343 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 GYPAP02724 150 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 CD1AP06126 327 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 CD2P06729 351 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 ACAA1P09110 424 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 HOXB4P17483 251 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 ATF1P18846 271 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 GLRA1P23415 457 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 AZGP1P25311 298 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 ZFP36P26651 326 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 RBP2P50120 134 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 ACSM1Q08AH1 577 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 IRF3Q14653 427 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 YIF1BQ5BJH7 314 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 RBM48Q5RL73 367 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 DCAF12L2Q5VW00 463 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 LYPD2Q6UXB3 125 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 ZNF841Q6ZN19 808 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 CALHM1Q8IU99 346 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 SERPINA12Q8IW75 414 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 OR13C9Q8NGT0 318 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 NRIP2Q9BQI9 281 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 WDR13Q9H1Z4 485 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 DUSP21Q9H596 190 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 ZCCHC4Q9H5U6 513 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 NEK6Q9HC98 313 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 HES4Q9HCC6 221 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 RASL12Q9NYN1 266 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 NLKQ9UBE8 527 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 CLN8Q9UBY8 286 aa9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 LSM2Q9Y333 95 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-209ENST00000552896 TRBV5-5A0A0J9YX44 114 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 TMPRSS2O15393 492 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 PHF1O43189 567 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 OCM2P0CE71 109 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 OCMP0CE72 109 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 ATP1B3P54709 279 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 DOC2BQ14184 412 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 C11orf91Q3C1V1 193 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 ATPAF1Q5TC12 328 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 WDR25Q64LD2 544 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 ZNF529Q6P280 563 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 ACP7Q6ZNF0 438 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 PRSS48Q7RTY5 328 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 SLC36A1Q7Z2H8 476 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 TEX29Q8N6K0 151 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 ZFP41Q8N8Y5 198 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 OR5D14Q8NGL3 314 aa9.75□□□□□ -0.85
TRAFD1-209ENST00000552896 ANGPTL6Q8NI99 470 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms