RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 HMGN1P05114 100 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 CD14P08571 375 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 GABRB1P18505 474 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 DAP3P51398 398 aaKnown RBP6.91□□□□□ -1.3
PRKCH-203ENST00000552875 DYNLT3P51808 116 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 CDC42P60953 191 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 CXCR4P61073 352 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 ISL1P61371 349 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 SNRPGP62308 76 aaKnown RBP6.91□□□□□ -1.3
PRKCH-203ENST00000552875 RPL18Q07020 188 aaKnown RBP6.91□□□□□ -1.3
PRKCH-203ENST00000552875 MED21Q13503 144 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 OR8G1Q15617 311 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 ALG10Q5BKT4 473 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 SLC25A30Q5SVS4 291 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 GPR139Q6DWJ6 353 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 FAM122BQ7Z309 247 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 C8orf59Q8N0T1 100 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-203ENST00000552875 OR8J1Q8NGP2 316 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 OR9Q1Q8NGQ5 310 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 OR4Q3Q8NH05 313 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 OR51A7Q8NH64 312 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 FNDC8Q8TC99 324 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 CYGBQ8WWM9 190 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 C12orf43Q96C57 262 aaKnown RBP6.91□□□□□ -1.3
PRKCH-203ENST00000552875 ZNF570Q96NI8 536 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 ST6GALNAC5Q9BVH7 336 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 TSSK6Q9BXA6 273 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 TEX12Q9BXU0 123 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 MRPL13Q9BYD1 178 aaKnown RBP6.91□□□□□ -1.3
PRKCH-203ENST00000552875 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 FN3KQ9H479 309 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 TBC1D23Q9NUY8 699 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 C1orf123Q9NWV4 160 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 TAS2R5Q9NYW4 299 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 TBL2Q9Y4P3 447 aaKnown RBP6.91□□□□□ -1.3
PRKCH-203ENST00000552875 UBR4Q5T4S7 5183 aa6.91□□□□□ -1.3
PRKCH-203ENST00000552875 SGCEO43556 437 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 GNAO1P09471 354 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 CNTFRP26992 372 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 SDHAP31040 664 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 OR12D2P58182 307 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 SLC35B1P78383 322 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 HOXA4Q00056 320 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-203ENST00000552875 CD47Q08722 323 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 POU4F2Q12837 409 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 GINS1Q14691 196 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 SSX2Q16385 188 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 ABCA11PQ4W5N1 156 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 WDR38Q5JTN6 314 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 HCP5Q6MZN7 132 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 C10orf99Q6UWK7 81 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 THAP5Q7Z6K1 395 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 ZNF429Q86V71 674 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 SGPP2Q8IWX5 399 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 ENTHD1Q8IYW4 607 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 FGFRL1Q8N441 504 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 COMMD1Q8N668 190 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 FAM216BQ8N7L0 139 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 MOSPD2Q8NHP6 518 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 RHOXF1Q8NHV9 184 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 FAM81AQ8TBF8 368 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 SPRYD4Q8WW59 207 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-203ENST00000552875 ST6GALNAC6Q969X2 333 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 APOBEC3DQ96AK3 386 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-203ENST00000552875 RAX2Q96IS3 184 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 LYZL4Q96KX0 146 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 DUX3Q96PT4 197 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 CMC2Q9NRP2 79 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 INIPQ9NRY2 104 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 UGT2A1Q9Y4X1 527 aa6.9□□□□□ -1.3
PRKCH-203ENST00000552875 HERC1Q15751 4861 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 IGHV3OR15-7A0A075B7D8 119 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 NUPR2A6NF83 97 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 FAM90A8PA6NJQ4 464 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 BLOC1S5-TXNDC5H3BN57 136 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 AHCYL1O43865 530 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 GMDSO60547 372 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 TRMUO75648 421 aaKnown RBP6.89□□□□□ -1.31
PRKCH-203ENST00000552875 PGA5P0DJD9 388 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 IGHV4-30-4P0DP06 118 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 GP9P14770 177 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 MSR1P21757 451 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 AQP2P41181 271 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 TMED1Q13445 227 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 ARMC4Q5T2S8 1044 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 MEDAGQ5VYS4 303 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 TMEM236Q5W0B7 351 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 LINC00336Q6ZUF6 198 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 ADCK1Q86TW2 530 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 GCSAMQ8N6F7 178 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 IQCF1Q8N6M8 205 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 TMEM163Q8TC26 289 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 CHPT1Q8WUD6 406 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 APH1BQ8WW43 257 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 MED30Q96HR3 178 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 RBP7Q96R05 134 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 NR1H4Q96RI1 486 aaPredicted RBP6.89□□□□□ -1.31
PRKCH-203ENST00000552875 IFT27Q9BW83 186 aa6.89□□□□□ -1.31
PRKCH-203ENST00000552875 YTHDF1Q9BYJ9 559 aaKnown RBP6.89□□□□□ -1.31
PRKCH-203ENST00000552875 DNTTIP1Q9H147 329 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms