RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 RAB26Q9ULW5 256 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 GTF2A1LQ9UNN4 478 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 SNX5Q9Y5X3 404 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 KPTNQ9Y664 436 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 hCG_38984A0A1B0GV85 526 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 DVL1O14640 695 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 SRSF10O75494 262 aaKnown RBP9.75□□□□□ -0.85
CKAP4-202ENST00000552828 GYPAP02724 150 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 ARF6P62330 175 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 MFGE8Q08431 387 aaPredicted RBP9.75□□□□□ -0.85
CKAP4-202ENST00000552828 MZT1Q08AG7 82 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 SMN1Q16637 294 aaKnown RBP9.75□□□□□ -0.85
CKAP4-202ENST00000552828 CDONQ4KMG0 1287 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 ZNF684Q5T5D7 378 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 BCL2L15Q5TBC7 163 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 METAP1DQ6UB28 335 aaPredicted RBP9.75□□□□□ -0.85
CKAP4-202ENST00000552828 GDPGP1Q6ZNW5 385 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 COMMD2Q86X83 199 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 BOLLQ8N9W6 283 aaKnown RBP9.75□□□□□ -0.85
CKAP4-202ENST00000552828 CNIH3Q8TBE1 160 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 NPRL2Q8WTW4 380 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 DPAGT1Q9H3H5 408 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 TCF7L1Q9HCS4 588 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 INPP5EQ9NRR6 644 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 RPUSD1Q9UJJ7 312 aaKnown RBP9.75□□□□□ -0.85
CKAP4-202ENST00000552828 GNG8Q9UK08 70 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 OR52A1Q9UKL2 312 aa9.75□□□□□ -0.85
CKAP4-202ENST00000552828 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.74□□□□□ -0.85
CKAP4-202ENST00000552828 IRGMA1A4Y4 181 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 TSPAN9O75954 239 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 GNAO1P09471 354 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 ATP6V1B1P15313 513 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 GNALP38405 381 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 MAP2K3P46734 347 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 AQP4P55087 323 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 ACTA2P62736 377 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 ACTG2P63267 376 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 TP53I3Q53FA7 332 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 Q6ZSV7 163 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 ZNF826PQ6ZT77 177 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 LHFPL3Q86UP9 236 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 EGFL6Q8IUX8 553 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 C11orf53Q8IXP5 236 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 ELMOD2Q8IZ81 293 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 OR52I1Q8NGK6 324 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 OR51E1Q8TCB6 317 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 RORBQ92753 470 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 PPP1R14AQ96A00 147 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 LYZL4Q96KX0 146 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 TSC22D3Q99576 134 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 GPR84Q9NQS5 396 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 C14orf119Q9NWQ9 140 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 MYRFQ9Y2G1 1151 aa9.74□□□□□ -0.85
CKAP4-202ENST00000552828 A0A1B0GVI7 797 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 GPR37O15354 613 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 MTRF1O75570 445 aaKnown RBP9.73□□□□□ -0.85
CKAP4-202ENST00000552828 TSPAN15O95858 294 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 IGHA1P01876 353 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 TTRP02766 147 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 GRPP07492 148 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 MUC1P15941 1255 aaPredicted RBP9.73□□□□□ -0.85
CKAP4-202ENST00000552828 DCKP27707 260 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 OR12D2P58182 307 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 RIPPLY1Q0D2K3 151 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 GALEQ14376 348 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 VMO1Q7Z5L0 202 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 THAP5Q7Z6K1 395 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 CATSPERDQ86XM0 798 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 SCCPDHQ8NBX0 429 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 OR8S1Q8NH09 359 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 ALG8Q9BVK2 526 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 PAPOLGQ9BWT3 736 aaKnown RBP9.73□□□□□ -0.85
CKAP4-202ENST00000552828 FGF20Q9NP95 211 aaPredicted RBP9.73□□□□□ -0.85
CKAP4-202ENST00000552828 ERVK13-1Q9NX77 482 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 ZNRD1Q9P1U0 126 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 FAM96BQ9Y3D0 163 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 RHBDD3Q9Y3P4 386 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 MPC1Q9Y5U8 109 aa9.73□□□□□ -0.85
CKAP4-202ENST00000552828 ZNF816-ZNF321PA0A0X1KG74 233 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 SMIM31A0A1B0GVY4 71 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 ANXA2P2A6NMY6 339 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.72□□□□□ -0.85
CKAP4-202ENST00000552828 J3QLW9 94 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 DHRS3O75911 302 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 CST4P01036 141 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 IGLV3-1P01715 115 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 FBP1P09467 338 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 ZNF19P17023 458 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 ACKR3P25106 362 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 MICBQ29980 383 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 C2orf68Q2NKX9 166 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 ATPAF1Q5TC12 328 aaPredicted RBP9.72□□□□□ -0.85
CKAP4-202ENST00000552828 PDZD9Q8IXQ8 264 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 SYS1Q8N2H4 156 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 FBLIM1Q8WUP2 373 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 ST8SIA4Q92187 359 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 PIGCQ92535 297 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 C12orf43Q96C57 262 aaKnown RBP9.72□□□□□ -0.85
CKAP4-202ENST00000552828 C4orf36Q96KX1 117 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 HIST1H2AAQ96QV6 131 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms