RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 RIPK1Q13546 671 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 SMIM21Q3B7S5 101 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 CD276Q5ZPR3 534 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 RPL22L1Q6P5R6 122 aaKnown RBP15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 RAB40AQ8WXH6 277 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 SEH1LQ96EE3 360 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 CCL13Q99616 98 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 SCN3BQ9NY72 215 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 KAAG1Q9UBP8 84 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 PSORS1C1Q9UIG5 152 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 AUP1Q9Y679 476 aa15.39■□□□□ 0.05
PRPF40B-216ENST00000552301 IGHV2-70DA0A0C4DH43 119 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 SYNGR1O43759 233 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 ENSAO43768 121 aaKnown RBP15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 GTF2A1P52655 376 aaPredicted RBP15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 ATP1B3P54709 279 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 CDK5R1Q15078 307 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 STUMQ69YW2 141 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 UTS2BQ765I0 119 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 PRIMA1Q86XR5 153 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 POC1AQ8NBT0 407 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 OR5T2Q8NGG2 359 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 OR51A4Q8NGJ6 313 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 NANPQ8TBE9 248 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 ST8SIA4Q92187 359 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 SPSB1Q96BD6 273 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 NUDT16L1Q9BRJ7 211 aaKnown RBP15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 PKIBQ9C010 78 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 DNTTIP1Q9H147 329 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 BABAM2Q9NXR7 383 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 RASL12Q9NYN1 266 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 CLEC2DQ9UHP7 191 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 METRNQ9UJH8 293 aa15.38■□□□□ 0.05
PRPF40B-216ENST00000552301 OR2AT4A6NND4 320 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 DVL1O14640 695 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 TNFRSF13BO14836 293 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 NDUFB3O43676 98 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 NXPH2O95156 264 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 CYB5AP00167 134 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 PLATP00750 562 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 PGA5P0DJD9 388 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 ATF1P18846 271 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 AZGP1P25311 298 aaKnown RBP15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 GABRA2P47869 451 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 RBP2P50120 134 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 IKZF1Q13422 519 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 LRRC10Q5BKY1 277 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 ARMCX4Q5H9R4 360 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 C6orf141Q5SZD1 244 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 LAIR2Q6ISS4 152 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 ZNF841Q6ZN19 808 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 C1QL2Q7Z5L3 287 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 ANGPTL5Q86XS5 388 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 FAM216BQ8N7L0 139 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 DNAAF1Q8NEP3 725 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 OR13C9Q8NGT0 318 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 GATAD2BQ8WXI9 593 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 OPALINQ96PE5 141 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 SMURF1Q9HCE7 757 aa15.37■□□□□ 0.05
PRPF40B-216ENST00000552301 SLC1A7O00341 560 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 ECDO95905 644 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 AVPP01185 164 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 CD2P06729 351 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 ADRA2CP18825 462 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 MYF6P23409 242 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 MPZP25189 248 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 POU3F4P49335 361 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 MTCP1P56278 107 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 TAS2R43P59537 309 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 IL13RA1P78552 427 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 IL24Q13007 206 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 XAF1Q6GPH4 301 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 LHFPL2Q6ZUX7 228 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 CALHM1Q8IU99 346 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 GPR148Q8TDV2 347 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 MYDGFQ969H8 173 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 SMIM19Q96E16 107 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 MED30Q96HR3 178 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 ZNF488Q96MN9 340 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 ANKRD60Q9BZ19 345 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 RASSF4Q9H2L5 321 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 ZCCHC4Q9H5U6 513 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 ERGIC3Q9Y282 383 aa15.36■□□□□ 0.05
PRPF40B-216ENST00000552301 C22orf46C9J442 243 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 PTGES3LE9PB15 166 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 C21orf33P30042 268 aaPredicted RBP15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 VHLP40337 213 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 C11orf91Q3C1V1 193 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 ATPAF1Q5TC12 328 aaPredicted RBP15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 ACP7Q6ZNF0 438 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 C1orf229Q6ZS94 237 aaPredicted RBP15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 SERPINA12Q8IW75 414 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 PNLDC1Q8NA58 520 aaKnown RBP15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 OR5D14Q8NGL3 314 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 ANGPTL6Q8NI99 470 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 NRIP2Q9BQI9 281 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 OPN4Q9UHM6 478 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 TPRKBQ9Y3C4 175 aa15.35■□□□□ 0.05
PRPF40B-216ENST00000552301 IGKV1-9A0A0C4DH69 117 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 KIR2DS1A0A191URI9 304 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms