RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 IL22Q9GZX6 179 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 GBA3Q9H227 469 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 ELOVL6Q9H5J4 265 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 ZC4H2Q9NQZ6 224 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 ZNF446Q9NWS9 450 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 TREM2Q9NZC2 230 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 AHSPQ9NZD4 102 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 MTCH1Q9NZJ7 389 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 TAC3Q9UHF0 121 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 RIMS3Q9UJD0 308 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 KLHL21Q9UJP4 597 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 BOKQ9UMX3 212 aaPredicted RBP2.92□□□□□ -1.94
LIMA1-208ENST00000551691 MOKQ9UQ07 419 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 CHCHD2Q9Y6H1 151 aaPredicted RBP2.92□□□□□ -1.94
LIMA1-208ENST00000551691 EXPH5Q8NEV8 1989 aa2.92□□□□□ -1.94
LIMA1-208ENST00000551691 A0A087X002 238 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 A0A1W2PPE3 182 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 F8VZ95 297 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 K7EIL1 84 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 ZNF701M0R085 212 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 SIRPB1O00241 398 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 SLC17A2O00624 439 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 EIF3HO15372 352 aaKnown RBP eCLIP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 OR7A10O76100 309 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 KBTBD11O94819 623 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 OR2F2O95006 317 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 ETHE1O95571 254 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 CALB1P05937 261 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 LAMP1P11279 417 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 GATA1P15976 413 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 IGHV1-2P23083 117 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 PRTN3P24158 256 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 FOXN2P32314 431 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 RPA3P35244 121 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 YAP1P46937 504 aaKnown RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 CX3CR1P49238 355 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 MRPL19P49406 292 aaKnown RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 TMED10P49755 219 aaKnown RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 LHX2P50458 406 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 FABP6P51161 128 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 BIDP55957 195 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 CLDN8P56748 225 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 FBXW4P57775 412 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 RAB8AP61006 207 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 PRDX1Q06830 199 aaKnown RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 IFT88Q13099 833 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 DPYSL3Q14195 570 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 PAGE2BQ5JRK9 111 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 CASC10Q5T4H9 136 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 TIGD3Q6B0B8 471 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 REEP3Q6NUK4 255 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 OPN5Q6U736 354 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 C2orf66Q6UXQ4 117 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 NOTCH2NLQ7Z3S9 236 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 LINC00523Q86TU6 105 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 CDKL3Q8IVW4 592 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 ZCCHC24Q8N2G6 241 aaKnown RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 ABHD12Q8N2K0 398 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 MUC15Q8N387 334 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 JAGN1Q8N5M9 183 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 ZNF740Q8NDX6 193 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 TMEM104Q8NE00 496 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 OR4K14Q8NGD5 310 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 RHEBL1Q8TAI7 183 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 PLPPR1Q8TBJ4 325 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 SLC7A13Q8TCU3 470 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 ACMSDQ8TDX5 336 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 ITLN1Q8WWA0 313 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 GIMAP1Q8WWP7 306 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 UCN3Q969E3 161 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 TMIGD2Q96BF3 282 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 FGGYQ96C11 551 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 CERS2Q96G23 380 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 DNAJC1Q96KC8 554 aaKnown RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 ZFP3Q96NJ6 502 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 SLC29A1Q99808 456 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 CCDC28BQ9BUN5 200 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 SUCNR1Q9BXA5 334 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 MFFQ9GZY8 342 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 TRABDQ9H4I3 376 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 PLGRKTQ9HBL7 147 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 CBLN4Q9NTU7 201 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 QPCTLQ9NXS2 382 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 OR1A1Q9P1Q5 309 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 PEF1Q9UBV8 284 aaKnown RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 HEY1Q9Y5J3 304 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 FLVCR1Q9Y5Y0 555 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 BZW2Q9Y6E2 419 aaKnown RBP2.91□□□□□ -1.94
LIMA1-208ENST00000551691 ARHGAP32A7KAX9 2087 aa2.91□□□□□ -1.94
LIMA1-208ENST00000551691 A0A087WYN8 130 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 A0A0G2JN53 185 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 A0A1B0GWB2 263 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 SLC22A20A6NK97 555 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 C17orf51A8MQB3 221 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 C4orf51C9J302 202 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 M0R3G1 203 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 DCTN6O00399 190 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 SAP18O00422 153 aaKnown RBP2.9□□□□□ -1.95
LIMA1-208ENST00000551691 TXNDC9O14530 226 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 HSD17B6O14756 317 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms