RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 ROS1P08922 2347 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 MYO9AB2RTY4 2548 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 UNC79Q9P2D8 2635 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 PKDREJQ9NTG1 2253 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 TANC2Q9HCD6 1990 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 WIPF3A6NGB9 483 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ZSCAN5BA6NJL1 495 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF732B4DXR9 585 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 E7EQL1 145 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 SPRY1O43609 319 aaPredicted RBP6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ANGPTL7O43827 346 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 CTAG2O75638 210 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 BPNT1O95861 308 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 PLATP00750 562 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 APOA1P02647 267 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 OCMP0CE72 109 aaPredicted RBP6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ARSBP15848 533 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 RBP2P50120 134 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ATP1B3P54709 279 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 KLF3P57682 345 aaPredicted RBP6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 PDZK1IP1Q13113 114 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF846Q147U1 533 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 OR8G1Q15617 311 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ADIPOQQ15848 244 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 BEX5Q5H9J7 111 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 AWAT2Q6E213 333 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ASCL4Q6XD76 172 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 IZUMO1Q8IYV9 350 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 FTMTQ8N4E7 242 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 TMEM104Q8NE00 496 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 OR10AD1Q8NGE0 317 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 OR5A2Q8NGI9 324 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 OR10K1Q8NGX5 313 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 LILRB1Q8NHL6 650 aaPredicted RBP6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 TNFAIP8L1Q8WVP5 186 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 CYYR1Q96J86 154 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 RNF170Q96K19 258 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 CMTM3Q96MX0 182 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 TMEM204Q9BSN7 226 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 SRRQ9GZT4 340 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ESRP2Q9H6T0 727 aaKnown RBP6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 MSL2Q9HCI7 577 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 HMG20AQ9NP66 347 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 CA10Q9NS85 328 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 EXTL2Q9UBQ6 330 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 FBLN5Q9UBX5 448 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ADAM30Q9UKF2 790 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 TEX15Q9BXT5 2789 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 ABCA4P78363 2273 aa6.88□□□□□ -1.31
DEPDC4-207ENST00000549249 A0A0A6YYD4 124 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 A0A0G2JMP0 313 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 A0A0X1KG70 313 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 OR5B21A6NL26 309 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 F5H5P2 479 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 CDC14BO60729 498 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 CD3EP07766 207 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 RAB6AP20340 208 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 CDK2P24941 298 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 MPZP25189 248 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 CD40LGP29965 261 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 HAAOP46952 286 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 PTH2RP49190 550 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 ART1P52961 327 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 GNG3P63215 75 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF45Q02386 682 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF154Q13106 437 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 MAB21L1Q13394 359 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 MOGAT2Q3SYC2 334 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 SLC22A6Q4U2R8 563 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 SPRNQ5BIV9 151 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 SPANXN2Q5MJ10 180 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 METAP1DQ6UB28 335 aaPredicted RBP6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 FAM131AQ6UXB0 335 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 SLC25A26Q70HW3 274 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 OR2W3Q7Z3T1 314 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 RTN4RL2Q86UN3 420 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 SNX29P2Q8IUI4 249 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF611Q8N823 705 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 PNLDC1Q8NA58 520 aaKnown RBP6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 ACBD4Q8NC06 268 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 PXT1Q8NFP0 134 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 OR4M2Q8NGB6 313 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 ZFAND2BQ8WV99 257 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 RAB40AQ8WXH6 277 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 FAM46BQ96A09 425 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 PTX4Q96A99 478 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 PIK3IP1Q96FE7 263 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 GAL3ST1Q99999 423 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 NICN1Q9BSH3 213 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 RTL8AQ9BWD3 113 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 OR51I2Q9H344 312 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 BANF2Q9H503 90 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 NEK6Q9HC98 313 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 TMEM100Q9NV29 134 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 TAAR3PQ9P1P4 343 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 DUSP13Q9UII6 198 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 ING4Q9UNL4 249 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 RNF115Q9Y4L5 304 aa6.87□□□□□ -1.31
DEPDC4-207ENST00000549249 DYSFO75923 2080 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 IGHV3-64DA0A0J9YX35 117 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms