RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FAM189A2Q15884 450 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 SP6Q3SY56 376 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF283Q8N7M2 679 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 AKR7LQ8NHP1 331 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 MESP1Q9BRJ9 268 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 PAPOLGQ9BWT3 736 aaKnown RBP12.03□□□□□ -0.48
HDAC7-228ENST00000548938 CHRDQ9H2X0 955 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 TMPRSS5Q9H3S3 457 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 PLEKHA2Q9HB19 425 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 PNRC2Q9NPJ4 139 aaKnown RBP12.03□□□□□ -0.48
HDAC7-228ENST00000548938 GPR27Q9NS67 375 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 A0A1W2PPC4 97 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 H3BMH7 237 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 MSTNO14793 375 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 CCL1P22362 96 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 PPP1CCP36873 323 aaKnown RBP12.03□□□□□ -0.48
HDAC7-228ENST00000548938 RPS23P62266 143 aaKnown RBP12.03□□□□□ -0.48
HDAC7-228ENST00000548938 SLC35A1P78382 337 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 C1orf189Q5VU69 101 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 DOK3Q7L591 496 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 HSD17B11Q8NBQ5 300 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 NOXO1Q8NFA2 376 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 INTS12Q96CB8 462 aaKnown RBP12.03□□□□□ -0.48
HDAC7-228ENST00000548938 DDIT4LQ96D03 193 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 GGACTQ9BVM4 153 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 VN1R1Q9GZP7 353 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 LIME1Q9H400 295 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 ELL3Q9HB65 397 aaPredicted RBP12.03□□□□□ -0.48
HDAC7-228ENST00000548938 KCNJ16Q9NPI9 418 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 ALKBH4Q9NXW9 302 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 RTTNQ86VV8 2226 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 IGHV1OR15-9A0A0B4J2B8 117 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 EFNA2O43921 213 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 CTSDP07339 412 aaPredicted RBP12.02□□□□□ -0.48
HDAC7-228ENST00000548938 PGA4P0DJD7 388 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 PGA3P0DJD8 388 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 APOBEC1P41238 236 aaKnown RBP12.02□□□□□ -0.48
HDAC7-228ENST00000548938 THEM4Q5T1C6 240 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 DEFB119Q8N690 84 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 OR14K1Q8NGZ2 314 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 GINS3Q9BRX5 216 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 SLC35B3Q9H1N7 401 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 PADI1Q9ULC6 663 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 HDGFL3Q9Y3E1 203 aa12.02□□□□□ -0.48
HDAC7-228ENST00000548938 BORCS7-ASMTA0A0B4J1R7 106 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 SERPINE3A8MV23 424 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 E5RGE8 158 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 YIF1AO95070 293 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 FBLP22087 321 aaKnown RBP12.02□□□□□ -0.49
HDAC7-228ENST00000548938 GABRR1P24046 479 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 P2RY1P47900 373 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 BLKP51451 505 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 C9orf152Q5JTZ5 239 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 DTX1Q86Y01 620 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 HPSE2Q8WWQ2 592 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 TOMM40LQ969M1 308 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 ZDHHC8Q9ULC8 765 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 NSG2Q9Y328 171 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 A0A1W2PNV4 684 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 VSTM2BA6NLU5 285 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 PIGPP57054 158 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 MYBPHQ13203 477 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 OR2B11Q5JQS5 317 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 PLXDC2Q6UX71 529 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 WDSUB1Q8N9V3 476 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 LYZL4Q96KX0 146 aa12.02□□□□□ -0.49
HDAC7-228ENST00000548938 PUS1Q9Y606 427 aaKnown RBP eCLIP12.02□□□□□ -0.49
HDAC7-228ENST00000548938 COL6A3P12111 3177 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 LILRA5A6NI73 299 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 IGHG1P01857 330 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 GLI4P10075 376 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 FOSL2P15408 326 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 LMO1P25800 156 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 HTR5AP47898 357 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 TSPO2Q5TGU0 170 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 UEVLDQ8IX04 471 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 KLHDC7BQ96G42 594 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 YPEL4Q96NS1 127 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 CDX2Q99626 313 aaPredicted RBP12.01□□□□□ -0.49
HDAC7-228ENST00000548938 TOLLIPQ9H0E2 274 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 MYO7BQ6PIF6 2116 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 IFITM10A6NMD0 228 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 RHPN2P1A8MT19 583 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 OR2C1O95371 312 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 IFNA17P01571 189 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 OR5AC1P0C628 307 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 TMEM225BP0DP42 221 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 FAHP16930 419 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 RAB2AP61019 212 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 RNF4P78317 190 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 KIAA0141Q14154 515 aaPredicted RBP12.01□□□□□ -0.49
HDAC7-228ENST00000548938 UBE2V2Q15819 145 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 CDCP2Q5VXM1 449 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 HEPN1Q6WQI6 88 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 TMEM182Q6ZP80 229 aaPredicted RBP12.01□□□□□ -0.49
HDAC7-228ENST00000548938 LYZL2Q7Z4W2 148 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 OR1L3Q8NH93 324 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 FAM213BQ8TBF2 198 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 LMX1AQ8TE12 382 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 PIGTQ969N2 578 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms