RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 PIGCQ92535 297 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 RORBQ92753 470 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 NEIL1Q96FI4 390 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-217ENST00000548420 TBX5Q99593 518 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 MICU1Q9BPX6 476 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 MMP28Q9H239 520 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 TRIM36Q9NQ86 728 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 MRPS18AQ9NVS2 196 aaKnown RBP11.48□□□□□ -0.57
PTCH1-217ENST00000548420 AASSQ9UDR5 926 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 FOXJ3Q9UPW0 622 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 V9GYS6 101 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 TRAV38-1A0A0B4J264 116 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 OOEPA6NGQ2 149 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-217ENST00000548420 NDUFA2O43678 99 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 MTRF1O75570 445 aaKnown RBP11.47□□□□□ -0.57
PTCH1-217ENST00000548420 TSPAN9O75954 239 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 SFTPBP07988 381 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 RPS2P15880 293 aaKnown RBP11.47□□□□□ -0.57
PTCH1-217ENST00000548420 CSNK2BP67870 215 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 KCNJ8Q15842 424 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 CEACAM21Q3KPI0 293 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 CDONQ4KMG0 1287 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 ESCO2Q56NI9 601 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 BCL2L15Q5TBC7 163 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 Q6ZTK2 550 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 KCTD20Q7Z5Y7 419 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 ZDHHC23Q8IYP9 409 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 YIPF7Q8N8F6 280 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 C19orf18Q8NEA5 215 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 OR5A2Q8NGI9 324 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 OR10Z1Q8NGY1 313 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 LGALS12Q96DT0 336 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 RNFT2Q96EX2 444 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 RNF170Q96K19 258 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 FAM71F1Q96KD3 344 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-217ENST00000548420 RTL8AQ9BWD3 113 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 SSBP3Q9BWW4 388 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-217ENST00000548420 C8orf4Q9NR00 106 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 SMPD3Q9NY59 655 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-217ENST00000548420 SLC22A13Q9Y226 551 aa11.47□□□□□ -0.57
PTCH1-217ENST00000548420 A6NLC8 198 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 SNTNA6NMZ2 147 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 CDIPTO14735 213 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 RPP14O95059 124 aaKnown RBP11.46□□□□□ -0.57
PTCH1-217ENST00000548420 MUC1P15941 1255 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-217ENST00000548420 ACTC1P68032 377 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 ACTA1P68133 377 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 WDR25Q64LD2 544 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-217ENST00000548420 SFRP4Q6FHJ7 346 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-217ENST00000548420 FDX2Q6P4F2 183 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 FAM90A1Q86YD7 464 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 ACBD7Q8N6N7 88 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 PACRGLQ8N7B6 248 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 SCCPDHQ8NBX0 429 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 APH1BQ8WW43 257 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 SSMEM1Q8WWF3 244 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 Q96MT0 163 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 ZNF649Q9BS31 505 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 OR51I2Q9H344 312 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 KAAG1Q9UBP8 84 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 RPUSD1Q9UJJ7 312 aaKnown RBP11.46□□□□□ -0.57
PTCH1-217ENST00000548420 PIGLQ9Y2B2 252 aa11.46□□□□□ -0.57
PTCH1-217ENST00000548420 KIR2DS1A0A191URI9 304 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 hCG_1807616A0A1W2PRN6 198 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 ANKRD65E5RJM6 399 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 P2RY10O00398 339 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 CASQ2O14958 399 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-217ENST00000548420 FCN3O75636 299 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 DBTP11182 482 aaKnown RBP11.45□□□□□ -0.58
PTCH1-217ENST00000548420 FAHP16930 419 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 PITPNBP48739 271 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 NPY4RP50391 375 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 GNB2P62879 340 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 GNG3P63215 75 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 ZNF91Q05481 1191 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 RCN1Q15293 331 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 C11orf91Q3C1V1 193 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 NKAPLQ5M9Q1 402 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 ATPAF1Q5TC12 328 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-217ENST00000548420 LPCAT4Q643R3 524 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 NLRC3Q7RTR2 1065 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 PRSS35Q8N3Z0 413 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 CCDC54Q8NEL0 328 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 OR8B3Q8NGG8 313 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 LRRC29Q8WV35 223 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 RAB40AQ8WXH6 277 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 HIST1H2AAQ96QV6 131 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 OR8B2Q96RD0 313 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 CTSZQ9UBR2 303 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 ENPP5Q9UJA9 477 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 SIGLEC9Q9Y336 463 aa11.45□□□□□ -0.58
PTCH1-217ENST00000548420 IGHV2-70DA0A0C4DH43 119 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 DAPL1A0PJW8 107 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 OR5B21A6NL26 309 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 ZNF732B4DXR9 585 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 WBP4O75554 376 aaKnown RBP11.44□□□□□ -0.58
PTCH1-217ENST00000548420 NRASP01111 189 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 IGHA1P01876 353 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 KIR3DL2P43630 455 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms