RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 CLN8Q9UBY8 286 aa9.07□□□□□ -0.96
GCN1-202ENST00000547263 EXOSC1Q9Y3B2 195 aaKnown RBP9.07□□□□□ -0.96
GCN1-202ENST00000547263 IGKV1D-17A0A075B6S4 117 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 LOC105371242A0A075B767 164 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 A0A1B0GW55 424 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 EFCAB10A6NFE3 127 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 SIGLEC5O15389 551 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 AKR7A2O43488 359 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 ADAM20O43506 726 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 SYNGR1O43759 233 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 GATBO75879 557 aaKnown RBP9.06□□□□□ -0.96
GCN1-202ENST00000547263 LIPFP07098 398 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 DUX4L2P0CJ85 424 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 DUX4L3P0CJ86 424 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 DUX4L4P0CJ87 422 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 DUX4L5P0CJ88 424 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 DUX4L6P0CJ89 424 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 DUX4L7P0CJ90 424 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 PSG2P11465 335 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 MMP9P14780 707 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 MYF6P23409 242 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 HAAOP46952 286 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 FUT6P51993 359 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 ST3GAL4Q11206 333 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 DOC2BQ14184 412 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 CDK5R1Q15078 307 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 ODF4Q2M2E3 257 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 OR2G6Q5TZ20 316 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 DMKNQ6E0U4 476 aaPredicted RBP9.06□□□□□ -0.96
GCN1-202ENST00000547263 FAHD2BQ6P2I3 314 aaPredicted RBP9.06□□□□□ -0.96
GCN1-202ENST00000547263 RPL22L1Q6P5R6 122 aaKnown RBP9.06□□□□□ -0.96
GCN1-202ENST00000547263 HAGHLQ6PII5 290 aaPredicted RBP9.06□□□□□ -0.96
GCN1-202ENST00000547263 DUX4L9Q6RFH8 374 aaPredicted RBP9.06□□□□□ -0.96
GCN1-202ENST00000547263 ACP7Q6ZNF0 438 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 SPSB1Q96BD6 273 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 FAHD2AQ96GK7 314 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 GAFA1Q96PS6 74 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 C7orf69Q9H7B7 122 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 BABAM2Q9NXR7 383 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 NLKQ9UBE8 527 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 DUX4Q9UBX2 424 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 OR5V1Q9UGF6 321 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 CLEC2DQ9UHP7 191 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 POLDIP2Q9Y2S7 368 aa9.06□□□□□ -0.96
GCN1-202ENST00000547263 SIRT4Q9Y6E7 314 aaPredicted RBP9.06□□□□□ -0.96
GCN1-202ENST00000547263 DSCAML1Q8TD84 2053 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 IGHV3OR15-7A0A075B7D8 119 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 A0A0A6YYJ9 748 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 A6NIN4 97 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 DVL1O14640 695 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 ENSAO43768 121 aaKnown RBP9.05□□□□□ -0.96
GCN1-202ENST00000547263 XPNPEP2O43895 674 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 ECDO95905 644 aaPredicted RBP9.05□□□□□ -0.96
GCN1-202ENST00000547263 PLATP00750 562 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 IFNA2P01563 188 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 CD1AP06126 327 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 ATF1P18846 271 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 GTF2A1P52655 376 aaPredicted RBP9.05□□□□□ -0.96
GCN1-202ENST00000547263 GBX2P52951 348 aaPredicted RBP9.05□□□□□ -0.96
GCN1-202ENST00000547263 CAV3P56539 151 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 ACSM1Q08AH1 577 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 CNN3Q15417 329 aaKnown RBP9.05□□□□□ -0.96
GCN1-202ENST00000547263 C6orf141Q5SZD1 244 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 C9orf139Q6ZV77 190 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 KCTD8Q6ZWB6 473 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 USP43Q70EL4 1123 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 ZNF771Q7L3S4 317 aaPredicted RBP9.05□□□□□ -0.96
GCN1-202ENST00000547263 SLC36A1Q7Z2H8 476 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 SMIM19Q96E16 107 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 PGLYRP3Q96LB9 341 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 PDCD1LG2Q9BQ51 273 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 NUDT16L1Q9BRJ7 211 aaKnown RBP9.05□□□□□ -0.96
GCN1-202ENST00000547263 CDCA4Q9BXL8 241 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 DUSP21Q9H596 190 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 PLEKHA1Q9HB21 404 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 MTCH1Q9NZJ7 389 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 RPUSD1Q9UJJ7 312 aaKnown RBP9.05□□□□□ -0.96
GCN1-202ENST00000547263 MAB21L2Q9Y586 359 aa9.05□□□□□ -0.96
GCN1-202ENST00000547263 TRBV5-5A0A0J9YX44 114 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 OR2AT4A6NND4 320 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 SLC1A7O00341 560 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 TMPRSS2O15393 492 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 GPX5O75715 221 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 ATP6V1G2O95670 118 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 SERPINA3P01011 423 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 GLRA1P23415 457 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 AZGP1P25311 298 aaKnown RBP9.04□□□□□ -0.96
GCN1-202ENST00000547263 C21orf33P30042 268 aaPredicted RBP9.04□□□□□ -0.96
GCN1-202ENST00000547263 RPS11P62280 158 aaKnown RBP eCLIP9.04□□□□□ -0.96
GCN1-202ENST00000547263 SLC35A2P78381 396 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 IRF3Q14653 427 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 DGUOKQ16854 277 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 CD276Q5ZPR3 534 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 TMPRSS11AQ6ZMR5 421 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 FGFRL1Q8N441 504 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 CD177Q8N6Q3 437 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 FAM216BQ8N7L0 139 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 BOLLQ8N9W6 283 aaKnown RBP9.04□□□□□ -0.96
GCN1-202ENST00000547263 OR5AK2Q8NH90 309 aa9.04□□□□□ -0.96
GCN1-202ENST00000547263 NANPQ8TBE9 248 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms