RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 RPP14O95059 124 aaKnown RBP12.64□□□□□ -0.39
SSH1-204ENST00000546697 RPSAP08865 295 aaKnown RBP12.64□□□□□ -0.39
SSH1-204ENST00000546697 GLRA1P23415 457 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 PRTN3P24158 256 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 NANOS3P60323 173 aaKnown RBP12.64□□□□□ -0.39
SSH1-204ENST00000546697 MRPL28Q13084 256 aaKnown RBP12.64□□□□□ -0.39
SSH1-204ENST00000546697 UBE2V2Q15819 145 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 DGUOKQ16854 277 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 LRRC10Q5BKY1 277 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 TMEM244Q5VVB8 128 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 HAGHLQ6PII5 290 aaPredicted RBP12.64□□□□□ -0.39
SSH1-204ENST00000546697 ACP7Q6ZNF0 438 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 KCTD8Q6ZWB6 473 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 FAM220AQ7Z4H9 259 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 BCL6BQ8N143 479 aaPredicted RBP12.64□□□□□ -0.39
SSH1-204ENST00000546697 PELI1Q96FA3 418 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 RASSF4Q9H2L5 321 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 DNAJB11Q9UBS4 358 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 MAB21L2Q9Y586 359 aa12.64□□□□□ -0.39
SSH1-204ENST00000546697 CENPVL3A0A0U1RRI6 287 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 LOC107986453A0A1B0GWG9 222 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 DAPL1A0PJW8 107 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 OR4C45A6NMZ5 311 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 CASQ2O14958 399 aaPredicted RBP12.63□□□□□ -0.39
SSH1-204ENST00000546697 NDUFB3O43676 98 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 WBP4O75554 376 aaKnown RBP12.63□□□□□ -0.39
SSH1-204ENST00000546697 GATBO75879 557 aaKnown RBP12.63□□□□□ -0.39
SSH1-204ENST00000546697 ALX3O95076 343 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 FADS2O95864 444 aaKnown RBP12.63□□□□□ -0.39
SSH1-204ENST00000546697 MT-ND2P03891 347 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 RNASE1P07998 156 aaKnown RBP12.63□□□□□ -0.39
SSH1-204ENST00000546697 HAAOP46952 286 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 FUT6P51993 359 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 OR12D2P58182 307 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 TP53I3Q53FA7 332 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 SIGLECL1Q8N7X8 197 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 RPS4Y2Q8TD47 263 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 TMIGD2Q96BF3 282 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 MRPL48Q96GC5 212 aaKnown RBP12.63□□□□□ -0.39
SSH1-204ENST00000546697 MS4A7Q9GZW8 240 aaPredicted RBP12.63□□□□□ -0.39
SSH1-204ENST00000546697 FGF20Q9NP95 211 aaPredicted RBP12.63□□□□□ -0.39
SSH1-204ENST00000546697 GNG8Q9UK08 70 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 GTF2A1LQ9UNN4 478 aa12.63□□□□□ -0.39
SSH1-204ENST00000546697 RPL36Q9Y3U8 105 aaKnown RBP12.63□□□□□ -0.39
SSH1-204ENST00000546697 TRBV23-1A0A0A0MS06 115 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 NKX6-3A6NJ46 265 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 M0R1W7 72 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 TOX4O94842 621 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 SFTPBP07988 381 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 SMIM21Q3B7S5 101 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 GPR157Q5UAW9 335 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 METTL11BQ5VVY1 283 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 FGFRL1Q8N441 504 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 TMEM86BQ8N661 226 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 NPRL2Q8WTW4 380 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 C22orf15Q8WYQ4 148 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 ST8SIA4Q92187 359 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 TNFRSF14Q92956 283 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 STMN2Q93045 179 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 NOX4Q9NPH5 578 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 GPR173Q9NS66 373 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 ERVK13-1Q9NX77 482 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 SLC25A10Q9UBX3 287 aaPredicted RBP12.62□□□□□ -0.39
SSH1-204ENST00000546697 MYRFQ9Y2G1 1151 aa12.62□□□□□ -0.39
SSH1-204ENST00000546697 IGKV1-27A0A075B6S5 117 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 IGKV1-9A0A0C4DH69 117 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 DNAJC9-AS1A6NH13 148 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 SYNGR1O43759 233 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 SELLP14151 372 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 ADARB1P78563 741 aaKnown RBP12.61□□□□□ -0.39
SSH1-204ENST00000546697 KLHL22Q53GT1 634 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 ZNF691Q5VV52 312 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 RBMS3Q6XE24 437 aaKnown RBP12.61□□□□□ -0.39
SSH1-204ENST00000546697 ZNF561Q8N587 486 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 Q8N7P7 452 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 OR5T2Q8NGG2 359 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 SPSB1Q96BD6 273 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 FAM234AQ9H0X4 552 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 PLEKHA1Q9HB21 404 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 SNTG1Q9NSN8 517 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 AASSQ9UDR5 926 aa12.61□□□□□ -0.39
SSH1-204ENST00000546697 IGHV1-69DA0A0B4J2H0 117 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 SERPINA3P01011 423 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 KNG1P01042 644 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 IGHV1-69P01742 117 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 HTR1AP08908 422 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 LIMS3P0CW19 117 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 LIMS4P0CW20 117 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 HKR1P10072 659 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 IL18R1Q13478 541 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 ALKBH1Q13686 389 aaKnown RBP12.6□□□□□ -0.39
SSH1-204ENST00000546697 DMRTC1Q5HYR2 192 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 TTC23Q5W5X9 447 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 Q6YL49 198 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 CD177Q8N6Q3 437 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 OR52I1Q8NGK6 324 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 FBLIM1Q8WUP2 373 aa12.6□□□□□ -0.39
SSH1-204ENST00000546697 GATAD2BQ8WXI9 593 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms