RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 DNAJB11Q9UBS4 358 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 ZNF222Q9UK12 451 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 NUP50Q9UKX7 468 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 HHLA2Q9UM44 414 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 POLDIP2Q9Y2S7 368 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 A0A1B0GW55 424 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 A6NIN4 97 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 NKX6-3A6NJ46 265 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 OR2AT4A6NND4 320 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 ZNF879B4DU55 563 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 SIGLEC5O15389 551 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 SERPINA3P01011 423 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 DUX4L2P0CJ85 424 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 DUX4L3P0CJ86 424 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 DUX4L4P0CJ87 422 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 DUX4L5P0CJ88 424 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 DUX4L6P0CJ89 424 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 DUX4L7P0CJ90 424 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 LIMS3P0CW19 117 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 LIMS4P0CW20 117 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 FPR2P25090 351 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 CAPGP40121 348 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 FUT6P51993 359 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 HILS1P60008 231 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 DUX4L9Q6RFH8 374 aaPredicted RBP9.83□□□□□ -0.84
YBX3-217ENST00000546164 C9orf139Q6ZV77 190 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 BTN2A1Q7KYR7 527 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 FAM216BQ8N7L0 139 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 PNLDC1Q8NA58 520 aaKnown RBP9.83□□□□□ -0.84
YBX3-217ENST00000546164 DNAAF1Q8NEP3 725 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 OR5T2Q8NGG2 359 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 CNIH3Q8TBE1 160 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 ZFAND2BQ8WV99 257 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 TMIGD2Q96BF3 282 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 ADAT3Q96EY9 351 aaPredicted RBP9.83□□□□□ -0.84
YBX3-217ENST00000546164 SDSLQ96GA7 329 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 MED30Q96HR3 178 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 GAFA1Q96PS6 74 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 NRIP2Q9BQI9 281 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 SUCNR1Q9BXA5 334 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 RASSF4Q9H2L5 321 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 ISG20L2Q9H9L3 353 aaKnown RBP9.83□□□□□ -0.84
YBX3-217ENST00000546164 DUX4Q9UBX2 424 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 RPUSD1Q9UJJ7 312 aaKnown RBP9.83□□□□□ -0.84
YBX3-217ENST00000546164 SLC7A11Q9UPY5 501 aa9.83□□□□□ -0.84
YBX3-217ENST00000546164 IGKV1D-17A0A075B6S4 117 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 H3BSH0 61 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 NDUFB3O43676 98 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 SYNGR1O43759 233 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 PLATP00750 562 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 CCDC159P0C7I6 412 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 PSG2P11465 335 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 MMP9P14780 707 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 GBX2P52951 348 aaPredicted RBP9.82□□□□□ -0.84
YBX3-217ENST00000546164 GMFBP60983 142 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 FGF12P61328 243 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 ERVK11-1P61568 191 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 IL13RA1P78552 427 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 SLC34A1Q06495 639 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 IL24Q13007 206 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 CNN3Q15417 329 aaKnown RBP9.82□□□□□ -0.84
YBX3-217ENST00000546164 DGUOKQ16854 277 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 SMIM21Q3B7S5 101 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 LRRC10Q5BKY1 277 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 ACP7Q6ZNF0 438 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 CALHM1Q8IU99 346 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 PHC2Q8IXK0 858 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 BPIFB2Q8N4F0 458 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 LY6G5BQ8NDX9 201 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 C8orf46Q8TAG6 207 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 RPS4Y2Q8TD47 263 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 FBLIM1Q8WUP2 373 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 ST8SIA4Q92187 359 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 JMJD8Q96S16 334 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 VCXQ9H320 206 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 HES4Q9HCC6 221 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 SNTG1Q9NSN8 517 aa9.82□□□□□ -0.84
YBX3-217ENST00000546164 DIMT1Q9UNQ2 313 aaKnown RBP9.82□□□□□ -0.84
YBX3-217ENST00000546164 CAB39Q9Y376 341 aaPredicted RBP9.82□□□□□ -0.84
YBX3-217ENST00000546164 IGKV1-27A0A075B6S5 117 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 IGKV1-9A0A0C4DH69 117 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 FAM230AA0A1W2PPH8 454 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 TMEM212A6NML5 194 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 E9PI62 339 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 H0YJX3 145 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 ZFPL1O95159 310 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 VENTXO95231 258 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 MT-ND2P03891 347 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 GNAO1P09471 354 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 IGHV4-38-2P0DP08 117 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 PIPP12273 146 aaPredicted RBP9.81□□□□□ -0.84
YBX3-217ENST00000546164 PRKACBP22694 351 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 CAV3P56539 151 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 BPIFB3P59826 476 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 CCDC58Q4VC31 144 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 C8orf59Q8N0T1 100 aaPredicted RBP9.81□□□□□ -0.84
YBX3-217ENST00000546164 FGFRL1Q8N441 504 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 ZNF676Q8N7Q3 588 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 OR51A4Q8NGJ6 313 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 OR10AC1Q8NH08 325 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms