RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 SYNGR1O43759 233 aa17.14■□□□□ 0.33
HMGA2-211ENST00000545998 HEXAP06865 529 aa17.14■□□□□ 0.33
HMGA2-211ENST00000545998 IL24Q13007 206 aa17.14■□□□□ 0.33
HMGA2-211ENST00000545998 UBE2UQ5VVX9 321 aa17.14■□□□□ 0.33
HMGA2-211ENST00000545998 RAB39BQ96DA2 213 aa17.14■□□□□ 0.33
HMGA2-211ENST00000545998 TMED9Q9BVK6 235 aa17.14■□□□□ 0.33
HMGA2-211ENST00000545998 TRAV38-1A0A0B4J264 116 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 CEACAM18A8MTB9 384 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 OCMP0CE72 109 aaPredicted RBP17.13■□□□□ 0.33
HMGA2-211ENST00000545998 PGA5P0DJD9 388 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 RAB3AP20336 220 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 GZMKP49863 264 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 ATP1B3P54709 279 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 MTCP1P56278 107 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 RNF144BQ7Z419 303 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 FAM90A1Q86YD7 464 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 OR51A2Q8NGJ7 313 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 ORAI1Q96D31 301 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 SEH1LQ96EE3 360 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 DERL3Q96Q80 235 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 WDR13Q9H1Z4 485 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 PATZ1Q9HBE1 687 aaKnown RBP17.13■□□□□ 0.33
HMGA2-211ENST00000545998 NEK6Q9HC98 313 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 POLDIP2Q9Y2S7 368 aa17.13■□□□□ 0.33
HMGA2-211ENST00000545998 SONP18583 2426 aaKnown RBP17.12■□□□□ 0.33
HMGA2-211ENST00000545998 FAM157AC9JC47 383 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 F5H0A9 414 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-211ENST00000545998 TNFRSF13BO14836 293 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-211ENST00000545998 NOS1APO75052 506 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-211ENST00000545998 GPX5O75715 221 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 TNFAIP8O95379 198 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 LY6G6DO95868 133 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 ACAA1P09110 424 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-211ENST00000545998 MUC1P15941 1255 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-211ENST00000545998 IGFBP3P17936 291 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-211ENST00000545998 GMFBP60983 142 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 KCNJ8Q15842 424 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 CRIP3Q6Q6R5 217 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 UNQ9370/PRO34162Q6UXP9 181 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 DCDC5Q6ZRR9 648 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 PHC2Q8IXK0 858 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 POC1AQ8NBT0 407 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 MSI2Q96DH6 328 aaKnown RBP17.12■□□□□ 0.33
HMGA2-211ENST00000545998 SPACA5Q96QH8 159 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 GSX1Q9H4S2 264 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-211ENST00000545998 PCDHB10Q9UN67 800 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 ZFHX3Q15911 3703 aa17.12■□□□□ 0.33
HMGA2-211ENST00000545998 NIPBLQ6KC79 2804 aaeCLIP17.11■□□□□ 0.33
HMGA2-211ENST00000545998 IGHV3OR15-7A0A075B7D8 119 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 SC5DO75845 299 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 FSTP19883 344 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 INSL4Q14641 139 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 MICBQ29980 383 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 ACSM3Q53FZ2 586 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 ARMCX4Q5H9R4 360 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 CYB5R2Q6BCY4 276 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 CLEC9AQ6UXN8 241 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 FCGR1BQ92637 280 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 THRSPQ92748 146 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 C12orf43Q96C57 262 aaKnown RBP17.11■□□□□ 0.33
HMGA2-211ENST00000545998 ZNF488Q96MN9 340 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 SF3B6Q9Y3B4 125 aaKnown RBP17.11■□□□□ 0.33
HMGA2-211ENST00000545998 ARHGAP32A7KAX9 2087 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 WNK2Q9Y3S1 2297 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 HIVEP2P31629 2446 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 A0A1W2PPK0 400 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 PIN1P1O15428 100 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 CD5LO43866 347 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 HCKP08631 526 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 GLRA1P23415 457 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 MAPK3P27361 379 aaPredicted RBP17.11■□□□□ 0.33
HMGA2-211ENST00000545998 PPP3R1P63098 170 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 LYPD2Q6UXB3 125 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 SLC25A26Q70HW3 274 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 RFT1Q96AA3 541 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 NRIP2Q9BQI9 281 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 NOX4Q9NPH5 578 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 RASL12Q9NYN1 266 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 MIOXQ9UGB7 285 aa17.11■□□□□ 0.33
HMGA2-211ENST00000545998 TRAV8-7A0A075B6U6 113 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 NDUFA2O43678 99 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 PLATP00750 562 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 GYPAP02724 150 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 ALDOBP05062 364 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 WNT2P09544 360 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 RPS2P15880 293 aaKnown RBP17.1■□□□□ 0.33
HMGA2-211ENST00000545998 CPT2P23786 658 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 TGFBR2P37173 567 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 ERVK11-1P61568 191 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 RPS25P62851 125 aaKnown RBP17.1■□□□□ 0.33
HMGA2-211ENST00000545998 PDZK1IP1Q13113 114 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 KISS1Q15726 138 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 SSX1Q16384 188 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 STUMQ69YW2 141 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 LINC01356Q8N9X3 169 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 TMEM203Q969S6 136 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 ZNF696Q9H7X3 374 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 HES4Q9HCC6 221 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 TMEM138Q9NPI0 162 aa17.1■□□□□ 0.33
HMGA2-211ENST00000545998 MTCH1Q9NZJ7 389 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms