RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ZIC2O95409 532 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 NMBP08949 121 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 ERGP11308 486 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 C3AR1Q16581 482 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 RHOUQ7L0Q8 258 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 TGIF2LXQ8IUE1 241 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF383Q8NA42 475 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 KDF1Q8NAX2 398 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 OR10AD1Q8NGE0 317 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 OR51D1Q8NGF3 324 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 PTPMT1Q8WUK0 201 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 TPPP3Q9BW30 176 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 DENND4CQ5VZ89 1909 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 A0A087WUJ7 227 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF816-ZNF321PA0A0X1KG74 233 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 A0A1W2PQM1 296 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 C17orf112F2Z3M2 114 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 ARPC3O15145 178 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 SOX15O60248 233 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 FADS1O60427 444 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 FPR2P25090 351 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 RPS27P42677 84 aaKnown RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 RPS10P46783 165 aaKnown RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 TAF9Q16594 264 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 KDM4DQ6B0I6 523 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF679Q8IYX0 411 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 TM4SF19Q96DZ7 209 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 BSCL2Q96G97 398 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 DLL4Q9NR61 685 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 A0A0C4DFX4 3053 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 C4orf51C9J302 202 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 FAM157AC9JC47 383 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 SCG5P05408 212 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF25P17030 456 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 ATP5J2P56134 94 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 GNG3P63215 75 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 HTD2P86397 168 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 STUMQ69YW2 141 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 PAQR6Q6TCH4 344 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 BCDIN3DQ7Z5W3 292 aaKnown RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 CCDC71Q8IV32 467 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 TMEM52Q8NDY8 209 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 OR8B3Q8NGG8 313 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 RXFP4Q8TDU9 374 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 AP1S3Q96PC3 154 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 UHRF2Q96PU4 802 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 OR8B2Q96RD0 313 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 KCNIP2Q9NS61 270 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 RAB22AQ9UL26 194 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 FLVCR2Q9UPI3 526 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 AMDHD2Q9Y303 409 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 OR2M5A3KFT3 312 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 GDF9O60383 454 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 SP1P08047 785 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 SORDQ00796 357 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 BAXQ07812 192 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 PRDX4Q13162 271 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 PHLDA2Q53GA4 152 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 OR4C3Q8NH37 302 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 SCMH1Q96GD3 660 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 PLPPR2Q96GM1 343 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 BARX1Q9HBU1 254 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF629Q9UEG4 869 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 CGGBP1Q9UFW8 167 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 PRUNE2Q8WUY3 3088 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 CXorf65A6NEN9 183 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 PHOX2AO14813 284 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 HLA-AP01891 365 aaKnown RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 LIMK1P53667 647 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 RPS25P62851 125 aaKnown RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 VMA21Q3ZAQ7 101 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 KIRREL2Q6UWL6 708 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 LHFPL2Q6ZUX7 228 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 C10orf111Q8N326 155 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 OR1F12Q8NHA8 337 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 ARL11Q969Q4 196 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 SEH1LQ96EE3 360 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 KTI12Q96EK9 354 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-218ENST00000545889 OR14A2Q96R54 314 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 HRH4Q9H3N8 390 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 NRIP3Q9NQ35 241 aa7.66□□□□□ -1.18
CLIP1-218ENST00000545889 TRAV38-1A0A0B4J264 116 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 HSD17B6O14756 317 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 OR8U8P0C7N1 319 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 HTR1FP30939 366 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 P2RY4P51582 365 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 RAC3P60763 192 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF529Q6P280 563 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 SIAH3Q8IW03 269 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 NUBPLQ8TB37 319 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 FRZBQ92765 325 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 FAM3DQ96BQ1 224 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 SPACA5Q96QH8 159 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 NMES1Q9C002 83 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 HEXA-AS1Q9H8Q6 139 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 GDF2Q9UK05 429 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-218ENST00000545889 SPG11Q96JI7 2443 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 CBY3A6NI87 242 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 SLC31A2O15432 143 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 CT62P0C5K7 136 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms