RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 TACC2O95359 2948 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 IGKV1-27A0A075B6S5 117 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 LRRC30A6NM36 301 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 F5H5P2 479 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 SPRY3O43610 288 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 CD8AP01732 235 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 ARSBP15848 533 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 TGFBR1P36897 503 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 ZNF404Q494X3 552 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 AWAT2Q6E213 333 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 ELP2Q6IA86 826 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 NR2C2APQ86WQ0 139 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A1Q86YD7 464 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 C1orf87Q8N0U7 546 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 OR11L1Q8NGX0 322 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 KCNG3Q8TAE7 436 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 NPRL2Q8WTW4 380 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 AQP3Q92482 292 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 SLIRPQ9GZT3 109 aaKnown RBP13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 METTL9Q9H1A3 318 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 DLL4Q9NR61 685 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 RASL12Q9NYN1 266 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 DAPK2Q9UIK4 370 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 SPATA2Q9UM82 520 aa13.58□□□□□ -0.24
PRPF40A-212ENST00000545856 DYSFO75923 2080 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 LOC100289279A0A1B0GTE1 492 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 OVOL3O00110 214 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 TPD52L2O43399 206 aaKnown RBP13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 KDM4BO94953 1096 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 SOD3P08294 240 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 CLEC2LP0C7M8 214 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 PAX1P15863 534 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 RAB6AP20340 208 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 OR10A3P58181 314 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 CNPY1Q3B7I2 92 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 NHLRC3Q5JS37 347 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 HAGHLQ6PII5 290 aaPredicted RBP13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 CRIP3Q6Q6R5 217 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 LINC00596Q86U02 117 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 ANGPTL5Q86XS5 388 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 SCCPDHQ8NBX0 429 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 SLC25A28Q96A46 364 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM3DQ96BQ1 224 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 FGF23Q9GZV9 251 aaPredicted RBP13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 LIN7BQ9HAP6 207 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 RABL2AQ9UBK7 228 aaPredicted RBP13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 ADAM30Q9UKF2 790 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 RABL2BQ9UNT1 228 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 LAMP3Q9UQV4 416 aa13.57□□□□□ -0.24
PRPF40A-212ENST00000545856 H0YL77 283 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 TRAPPC2LH3BP13 241 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 AKR7A2O43488 359 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 TPPPO94811 219 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 PGA5P0DJD9 388 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 TMEM225BP0DP42 221 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 IRF2P14316 349 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 FIP1L1Q6UN15 594 aaKnown RBP13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 WDR86Q86TI4 376 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 CALHM1Q8IU99 346 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 POC1AQ8NBT0 407 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 OR4D6Q8NGJ1 314 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 OR51F2Q8NH61 342 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 DCUN1D5Q9BTE7 237 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 CACNG6Q9BXT2 260 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 BARHL1Q9BZE3 327 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 SEBOXQ9HB31 216 aaPredicted RBP13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 BARX1Q9HBU1 254 aaPredicted RBP13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 SMURF1Q9HCE7 757 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 PPP1R3CQ9UQK1 317 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 PLEKHA6Q9Y2H5 1048 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 NPTNQ9Y639 398 aa13.56□□□□□ -0.24
PRPF40A-212ENST00000545856 NAV2Q8IVL1 2488 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 A0A0A6YYH2 397 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A10PA6NDY2 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A18PA6NE21 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A16PA6NEW6 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A20PA6NIJ5 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 A6NJ64 397 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A8PA6NJQ4 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A7PA6NKC0 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A22PA8MWA6 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A12PA8MX19 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A5PA8MXJ8 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A23PA8MXZ1 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A15PP0C7V4 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A13PP0C7W8 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A14PP0C7W9 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 FAM90A24PP0C7X0 464 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 POU3F4P49335 361 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 RSU1Q15404 277 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 IDNKQ5T6J7 187 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 HES5Q5TA89 166 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 GLIPR1L1Q6UWM5 242 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 WDR82Q6UXN9 313 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 SLC25A26Q70HW3 274 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 ITLN1Q8WWA0 313 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 DVL3Q92997 716 aaPredicted RBP13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 CEP19Q96LK0 163 aa13.55□□□□□ -0.24
PRPF40A-212ENST00000545856 C1orf147Q96MC9 270 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms