RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 C1orf123Q9NWV4 160 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 FBXL17Q9UF56 701 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 C19orf25Q9UFG5 118 aaPredicted RBP13.79□□□□□ -0.2
LDLR-204ENST00000545707 MUC3AQ02505 3323 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 IGKV1-27A0A075B6S5 117 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 LOC102725191A0A1B0GVB3 256 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 ZIC3O60481 467 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 MTRF1O75570 445 aaKnown RBP13.79□□□□□ -0.2
LDLR-204ENST00000545707 ADH6P28332 368 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 FCGR2CP31995 323 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 CD80P33681 288 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 CAV2P51636 162 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 ZNF239Q16600 458 aaKnown RBP13.79□□□□□ -0.2
LDLR-204ENST00000545707 DHRS7BQ6IAN0 325 aaPredicted RBP13.79□□□□□ -0.2
LDLR-204ENST00000545707 MRPL14Q6P1L8 145 aaKnown RBP13.79□□□□□ -0.2
LDLR-204ENST00000545707 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.79□□□□□ -0.2
LDLR-204ENST00000545707 TMEM123Q8N131 208 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 ZIC4Q8N9L1 334 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 C2CD4CQ8TF44 421 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 PP6455Q8WZ26 134 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 TMEM54Q969K7 222 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 SEC11CQ9BY50 192 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 ULBP2Q9BZM5 246 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 PROK2Q9HC23 129 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
LDLR-204ENST00000545707 DNAJB11Q9UBS4 358 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 GHRLQ9UBU3 117 aa13.79□□□□□ -0.2
LDLR-204ENST00000545707 RNASEK-C17orf49H0YIS7 233 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 K7EPK0 472 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 SNAPINO95295 136 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 SFTA3P0C7M3 94 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 PET100P0DJ07 73 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 OR5H8P0DN80 308 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 NTF4P34130 210 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 AKR1C3P42330 323 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 FXYD4P59646 89 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 C10orf128Q5T292 105 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 IL34Q6ZMJ4 242 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 SGPP2Q8IWX5 399 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 FAM71E2Q8N5Q1 922 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 FNDC9Q8TBE3 224 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 ERGIC1Q969X5 290 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 Q96M66 194 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 AK3Q9UIJ7 227 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 PCDHGA1Q9Y5H4 931 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 A0A0J9YW62 118 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 ZNF850A8MQ14 1090 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 TMEM33P57088 247 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 ZNF774Q6NX45 483 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 SPEM1Q8N4L4 309 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 MARS2Q96GW9 593 aaKnown RBP13.78□□□□□ -0.2
LDLR-204ENST00000545707 SRXN1Q9BYN0 137 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 ANXA10Q9UJ72 324 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 NXT1Q9UKK6 140 aaKnown RBP13.78□□□□□ -0.2
LDLR-204ENST00000545707 PADI1Q9ULC6 663 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 ZNF175Q9Y473 711 aa13.78□□□□□ -0.2
LDLR-204ENST00000545707 CCDC85CA6NKD9 419 aa13.77□□□□□ -0.21
LDLR-204ENST00000545707 ZNHIT1O43257 154 aa13.77□□□□□ -0.21
LDLR-204ENST00000545707 OR8U9P0C7N5 309 aa13.77□□□□□ -0.21
LDLR-204ENST00000545707 EPHA8P29322 1005 aaPredicted RBP13.77□□□□□ -0.21
LDLR-204ENST00000545707 OTX1P32242 354 aaPredicted RBP13.77□□□□□ -0.21
LDLR-204ENST00000545707 PDZK1IP1Q13113 114 aa13.77□□□□□ -0.21
LDLR-204ENST00000545707 ZNF468Q5VIY5 522 aaPredicted RBP13.77□□□□□ -0.21
LDLR-204ENST00000545707 OR8U1Q8NH10 309 aa13.77□□□□□ -0.21
LDLR-204ENST00000545707 CMSS1Q9BQ75 279 aaKnown RBP13.77□□□□□ -0.21
LDLR-204ENST00000545707 UBE2ZQ9H832 354 aaPredicted RBP13.77□□□□□ -0.21
LDLR-204ENST00000545707 MEMO1Q9Y316 297 aa13.77□□□□□ -0.21
LDLR-204ENST00000545707 DIRAS3O95661 229 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 PIGPP57054 158 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 RSU1Q15404 277 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 PIGYQ3MUY2 71 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 PHLDA2Q53GA4 152 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 RAB11FIP2Q7L804 512 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 AKR7LQ8NHP1 331 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 RXFP4Q8TDU9 374 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 REEP6Q96HR9 211 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 SULT4A1Q9BR01 284 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 AMDHD2Q9Y303 409 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 PTRH2Q9Y3E5 179 aaKnown RBP13.76□□□□□ -0.21
LDLR-204ENST00000545707 PI4KAP42356 2102 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 MED19A0JLT2 244 aaPredicted RBP13.76□□□□□ -0.21
LDLR-204ENST00000545707 CRYM-AS1A6NIL9 109 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 XRCC2O43543 280 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 DEDDO75618 318 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 CRYBA1P05813 215 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 UMODP07911 640 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 NOVA1P51513 510 aaKnown RBP13.76□□□□□ -0.21
LDLR-204ENST00000545707 ZNF84P51523 738 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 TMEM268Q5VZI3 342 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 Q6ZRG5 221 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 SAT2Q96F10 170 aaPredicted RBP13.76□□□□□ -0.21
LDLR-204ENST00000545707 PRRX2Q99811 253 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 ESRP2Q9H6T0 727 aaKnown RBP13.76□□□□□ -0.21
LDLR-204ENST00000545707 DKKL1Q9UK85 242 aa13.76□□□□□ -0.21
LDLR-204ENST00000545707 MEX3AA1L020 520 aaKnown RBP13.75□□□□□ -0.21
LDLR-204ENST00000545707 K7ESF4 209 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 CST4P01036 141 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 CTSDP07339 412 aaPredicted RBP13.75□□□□□ -0.21
LDLR-204ENST00000545707 SPP1P10451 314 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 LIFP15018 202 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms