RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 SRSF7Q16629 238 aaKnown RBP eCLIP11.39□□□□□ -0.59
CPSF7-223ENST00000544669 IAH1Q2TAA2 248 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-223ENST00000544669 ABCA11PQ4W5N1 156 aa11.39□□□□□ -0.59
CPSF7-223ENST00000544669 GPR157Q5UAW9 335 aa11.39□□□□□ -0.59
CPSF7-223ENST00000544669 TMEM42Q69YG0 159 aa11.39□□□□□ -0.59
CPSF7-223ENST00000544669 AAED1Q7RTV5 226 aa11.39□□□□□ -0.59
CPSF7-223ENST00000544669 LRTM2Q8N967 370 aa11.39□□□□□ -0.59
CPSF7-223ENST00000544669 TAF9BQ9HBM6 251 aa11.39□□□□□ -0.59
CPSF7-223ENST00000544669 GSKIPQ9P0R6 139 aa11.39□□□□□ -0.59
CPSF7-223ENST00000544669 FBXO9Q9UK97 447 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-223ENST00000544669 C5orf42Q9H799 3197 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 BORCS7-ASMTA0A0B4J1R7 106 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 ZNF705EA8MWA4 302 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-223ENST00000544669 E5RGE8 158 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 F8W036 122 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 H0YIZ8 118 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 DNASE2O00115 360 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-223ENST00000544669 SDCBPO00560 298 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-223ENST00000544669 TNFSF11O14788 317 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 ADAP1O75689 374 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 KNG1P01042 644 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 NRASP01111 189 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 LCATP04180 440 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 GABRR1P24046 479 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 GLP1RP43220 463 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 FAM3AP98173 230 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 RAB32Q13637 225 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 RSPO1Q2MKA7 263 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-223ENST00000544669 KRTAP27-1Q3LI81 207 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 PHYHD1Q5SRE7 291 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 TMEM211Q6ICI0 200 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 C1QL2Q7Z5L3 287 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 OR5D18Q8NGL1 313 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 OR14L1PQ8NHC6 308 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 CPNE4Q96A23 557 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-223ENST00000544669 FBXO17Q96EF6 278 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 LIN37Q96GY3 246 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-223ENST00000544669 ZNF286AQ9HBT8 521 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 PROK2Q9HC23 129 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 PARP11Q9NR21 331 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 FAM86C1Q9NVL1 165 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 NSG2Q9Y328 171 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 KNL1Q8NG31 2342 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 UNC13CQ8NB66 2214 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 PCNX3Q9H6A9 2034 aa11.38□□□□□ -0.59
CPSF7-223ENST00000544669 ZNF850A8MQ14 1090 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 DEDDO75618 318 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 CFIP05156 583 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 SFTPBP07988 381 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 H2AFB1P0C5Y9 115 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 FAM157CP0CG43 387 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 ZNF728P0DKX0 622 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 RPL12P30050 165 aaKnown RBP11.37□□□□□ -0.59
CPSF7-223ENST00000544669 SULT1A2P50226 295 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 RAB5CP51148 216 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 CAV2P51636 162 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 F2RL1P55085 397 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 S100A10P60903 97 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 MALLQ13021 153 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 RBM39Q14498 530 aaKnown RBP11.37□□□□□ -0.59
CPSF7-223ENST00000544669 OSR2Q8N2R0 312 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 OR2V1Q8NHB1 315 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 TMED6Q8WW62 240 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 PIGTQ969N2 578 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 TMEM45BQ96B21 275 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 OR10C1Q96KK4 312 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 PARPBPQ9NWS1 579 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 ZNF816-ZNF321PA0A0X1KG74 233 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 HOXB5P09067 269 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 TCN2P20062 427 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 SSPNQ14714 243 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 SWI5Q1ZZU3 235 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 DCAF12Q5T6F0 453 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 CRIP3Q6Q6R5 217 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 C6orf201Q7Z4U5 140 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 LGI3Q8N145 548 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 NPRL2Q8WTW4 380 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 RRNAD1Q96FB5 475 aaKnown RBP11.37□□□□□ -0.59
CPSF7-223ENST00000544669 UCN2Q96RP3 112 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 PRRX2Q99811 253 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 FOXB1Q99853 325 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 MICU1Q9BPX6 476 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 NAA60Q9H7X0 242 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 TREM1Q9NP99 234 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 PLSCR2Q9NRY7 297 aa11.37□□□□□ -0.59
CPSF7-223ENST00000544669 FAM212BQ9NTI7 297 aaPredicted RBP11.37□□□□□ -0.59
CPSF7-223ENST00000544669 FER1L5A0AVI2 2057 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 HKR1P10072 659 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 CHATP28329 748 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 HTR5AP47898 357 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 IL13RA2Q14627 380 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 ABLIM2Q6H8Q1 611 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 H3F3CQ6NXT2 135 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 HAGHLQ6PII5 290 aaPredicted RBP11.36□□□□□ -0.59
CPSF7-223ENST00000544669 RNF144BQ7Z419 303 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 SAXO1Q8IYX7 474 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 UBAC2Q8NBM4 344 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 CRLF2Q9HC73 371 aa11.36□□□□□ -0.59
CPSF7-223ENST00000544669 GPR173Q9NS66 373 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms