RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SLC25A30Q5SVS4 291 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 CNTD2Q9H8S5 307 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 MAP1LC3B2A6NCE7 125 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 PDCD6O75340 191 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 CISD3P0C7P0 127 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 TMEM267Q0VDI3 215 aaPredicted RBP11.69□□□□□ -0.54
TNC-212ENST00000542877 SURF2Q15527 256 aaPredicted RBP11.69□□□□□ -0.54
TNC-212ENST00000542877 MCHR2Q969V1 340 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 FAAP24Q9BTP7 215 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 MAP1LC3BQ9GZQ8 125 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 TAAR3PQ9P1P4 343 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 ERRFI1Q9UJM3 462 aaPredicted RBP11.69□□□□□ -0.54
TNC-212ENST00000542877 SHISA8B8ZZ34 492 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 CD200P41217 278 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 B3GNTL1Q67FW5 361 aaPredicted RBP11.69□□□□□ -0.54
TNC-212ENST00000542877 TMEM37Q8WXS4 190 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 KISS1RQ969F8 398 aaPredicted RBP11.69□□□□□ -0.54
TNC-212ENST00000542877 NOL4LQ96MY1 436 aaPredicted RBP11.69□□□□□ -0.54
TNC-212ENST00000542877 FBXL17Q9UF56 701 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 MMP24Q9Y5R2 645 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 MTCH2Q9Y6C9 303 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 KIAA1551Q9HCM1 1747 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 A0A1B0GTH9 108 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 M0R1X1 148 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 NGFP01138 241 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 IGHA1P01876 353 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 CCL7P80098 99 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 WFDC8Q8IUA0 241 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 FAM24BQ8N5W8 94 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 ADAT1Q9BUB4 502 aaKnown RBP11.69□□□□□ -0.54
TNC-212ENST00000542877 LYRM2Q9NU23 88 aaPredicted RBP11.69□□□□□ -0.54
TNC-212ENST00000542877 PLPP3O14495 311 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 RFC3P40938 356 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 SELENOPP49908 381 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 PTTG1IPP53801 180 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 PWWP2BQ6NUJ5 590 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 C6orf201Q7Z4U5 140 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 STPG2Q8N412 459 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 HES4Q9HCC6 221 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 CACNA1CQ13936 2221 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 HRASP01112 189 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 CEACAM6P40199 344 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 OR3A4PP47883 348 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 ASCL1P50553 236 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 FAM3AP98173 230 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 CD300CQ08708 224 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 VMA21Q3ZAQ7 101 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 SPATA46Q5T0L3 261 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 OR2A2Q6IF42 318 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 ZNF770Q6IQ21 691 aaPredicted RBP11.68□□□□□ -0.54
TNC-212ENST00000542877 TRAT1Q6PIZ9 186 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 ACY3Q96HD9 319 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 TRBV5-3A0A0A0MS03 114 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 INPP5JQ15735 1006 aaPredicted RBP11.68□□□□□ -0.54
TNC-212ENST00000542877 TOMM20LQ6UXN7 152 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 GTF2H5Q6ZYL4 71 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 FAM210BQ96KR6 192 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 TMEM56Q96MV1 263 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 MRM2Q9UI43 246 aaKnown RBP11.68□□□□□ -0.54
TNC-212ENST00000542877 FAM24AA6NFZ4 105 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 LPAR6P43657 344 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 HIST1H3AP68431 136 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 VN1R4Q7Z5H5 301 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 FOXQ1Q9C009 403 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 ADAMTSL3P82987 1691 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
TNC-212ENST00000542877 TRAV20A0A0B4J274 112 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 TOX3O15405 576 aaPredicted RBP11.67□□□□□ -0.54
TNC-212ENST00000542877 CTSDP07339 412 aaPredicted RBP11.67□□□□□ -0.54
TNC-212ENST00000542877 RNPS1Q15287 305 aaKnown RBP11.67□□□□□ -0.54
TNC-212ENST00000542877 ATP6V1FQ16864 119 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 LILRA6Q6PI73 481 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 WIPI1Q5MNZ9 446 aaPredicted RBP11.67□□□□□ -0.54
TNC-212ENST00000542877 CARFQ8N187 725 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 ZNF107Q9UII5 783 aaPredicted RBP11.67□□□□□ -0.54
TNC-212ENST00000542877 SLC45A2Q9UMX9 530 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 GOLT1BQ9Y3E0 138 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 TTC3P53804 2025 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 BCORQ6W2J9 1755 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 LEUTXA8MZ59 168 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 GABRA1P14867 456 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 CTLA4P16410 223 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 PAX5Q02548 391 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 FA2HQ7L5A8 372 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 C20orf196Q8IYI0 205 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 OR2T6Q8NHC8 308 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 GPBAR1Q8TDU6 330 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 COX14Q96I36 57 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 ZNF737O75373 536 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 OR5AC1P0C628 307 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 PMCHP20382 165 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 IRF3Q14653 427 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 PRSS41Q7RTY9 318 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 BVESQ8NE79 360 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 NEIL1Q96FI4 390 aaPredicted RBP11.67□□□□□ -0.54
TNC-212ENST00000542877 WDR61Q9GZS3 305 aaKnown RBP11.67□□□□□ -0.54
TNC-212ENST00000542877 MIXL1Q9H2W2 232 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 LPAR3Q9UBY5 353 aa11.67□□□□□ -0.54
TNC-212ENST00000542877 LOC102723971A0A1B0GUV8 181 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms