RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ALG10BQ5I7T1 473 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 C10orf91Q5T1B1 145 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 SLC23A3Q6PIS1 610 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 OVCH1Q7RTY7 1134 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF550Q7Z398 422 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 OR1J2Q8NGS2 313 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 C5orf30Q96GV9 206 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 OR6C1Q96RD1 312 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 PADI1Q9ULC6 663 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 PSG11Q9UQ72 335 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 ATP23Q9Y6H3 246 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 V9GY05 133 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 IGKV1D-42A0A075B6H8 117 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 C13orf42A0A1B0GVH6 325 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 CLEC18AA5D8T8 446 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 RNASEK-C17orf49H0YIS7 233 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 NTN3O00634 580 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 CCL25O15444 150 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 SAP30O75446 220 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 RBMXL2O75526 392 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 UTS2O95399 124 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 PGAM2P15259 253 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 PDZD11Q5EBL8 140 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 CLEC18BQ6UXF7 455 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF664Q8N3J9 261 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 CLEC18CQ8NCF0 446 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 SDR9C7Q8NEX9 313 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 OR6N1Q8NGY5 312 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 OR51A7Q8NH64 312 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 STT3BQ8TCJ2 826 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 NAT6Q93015 286 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 GFI1Q99684 422 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 MICU1Q9BPX6 476 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 SULT4A1Q9BR01 284 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 WWTR1Q9GZV5 400 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 MMP26Q9NRE1 261 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 UBQLN4Q9NRR5 601 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 ST6GALNAC2Q9UJ37 374 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 ICAM5Q9UMF0 924 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 PPP1R3CQ9UQK1 317 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 FARSAQ9Y285 508 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 MED31Q9Y3C7 131 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 ARID1AO14497 2285 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 TRAV18A0A075B6X5 111 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 TRAV27A0A087WT01 109 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 A0A087WUJ7 227 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 IDSB3KWA1 339 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 C9orf172C9J069 976 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 M0QYG6 137 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 SULT2B1O00204 365 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 TGFAP01135 160 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 CD5P06127 495 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 TPT1P13693 172 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 RAB5AP20339 215 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 GRPRP30550 384 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 SIRPAP78324 504 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 ODF4Q2M2E3 257 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 LCN10Q6JVE6 187 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 MRPL21Q7Z2W9 205 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 TMPRSS12Q86WS5 348 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 DTWD2Q8NBA8 298 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 NFAM1Q8NET5 270 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 OR5AP2Q8NGF4 316 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 OR5L2Q8NGL0 311 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 CASTOR1Q8WTX7 329 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 HAVCR1Q96D42 359 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 SMIM19Q96E16 107 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 PELI1Q96FA3 418 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 THOC3Q96J01 351 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 NRSN2Q9GZP1 204 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 ADGRL4Q9HBW9 690 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 ACKR4Q9NPB9 350 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 ANKRD10Q9NXR5 420 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 POLR3KQ9Y2Y1 108 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 TNFRSF18Q9Y5U5 241 aa7.06□□□□□ -1.28
PDLIM5-221ENST00000542407 VPS13AQ96RL7 3174 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 PIN1P1O15428 100 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 PPP1R3DO95685 299 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 MBPP02686 304 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 MAS1P04201 325 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 AKAIN1P0CW23 69 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 FGF7P21781 194 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 NDUFA6P56556 154 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CRMP1Q14194 572 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CDK5R1Q15078 307 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 MESTQ5EB52 335 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CBLN3Q6UW01 205 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 SHISA6Q6ZSJ9 500 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 TMEM144Q7Z5S9 345 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 ANKRD37Q7Z713 158 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 PRR22Q8IZ63 422 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 GATSQ8NAP1 163 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 DCUN1D4Q92564 292 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 DAZLQ92904 295 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 IP6K3Q96PC2 410 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 CMKLR1Q99788 373 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 NKX3-1Q99801 234 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 VCX2Q9H322 139 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 SEC61A2Q9H9S3 476 aa7.05□□□□□ -1.28
PDLIM5-221ENST00000542407 FN3KRPQ9HA64 309 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms