RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ACKR4Q9NPB9 350 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 GHRLQ9UBU3 117 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 C9orf170A2RU37 121 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 C1orf196B1AJZ1 125 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 SPRY1O43609 319 aaPredicted RBP12.92□□□□□ -0.34
DDX55-209ENST00000542286 ADAP1O75689 374 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 IGHV2-70P01814 119 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 GABRR1P24046 479 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 PPT1P50897 306 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 SRSF4Q08170 494 aaKnown RBP12.92□□□□□ -0.34
DDX55-209ENST00000542286 NKAPLQ5M9Q1 402 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 SPINK14Q6IE38 97 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 HES7Q9BYE0 225 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 NELFAQ9H3P2 528 aa12.92□□□□□ -0.34
DDX55-209ENST00000542286 SEBOXQ9HB31 216 aaPredicted RBP12.92□□□□□ -0.34
DDX55-209ENST00000542286 MELTFP08582 738 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 FOLR2P14207 255 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 ZNF44P15621 663 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 DSCR4P56555 118 aaPredicted RBP12.91□□□□□ -0.34
DDX55-209ENST00000542286 MLF1P58340 268 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 LPCAT3Q6P1A2 487 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 PPP1R32Q7Z5V6 425 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 WDR5BQ86VZ2 330 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 DEFB123Q8N688 67 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 ADPRHL1Q8NDY3 354 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 RNF141Q8WVD5 230 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 PISDQ9UG56 409 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 CACNA1HO95180 2353 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 TMEM265A0A087WTH1 108 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 M0R135 149 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 TLX3O43711 291 aaPredicted RBP12.91□□□□□ -0.34
DDX55-209ENST00000542286 HIST1H1DP16402 221 aaKnown RBP12.91□□□□□ -0.34
DDX55-209ENST00000542286 SSBP1Q04837 148 aaKnown RBP12.91□□□□□ -0.34
DDX55-209ENST00000542286 C6orf201Q7Z4U5 140 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 UBALD2Q8IYN6 164 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 TMED6Q8WW62 240 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 PTX4Q96A99 478 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 PIK3IP1Q96FE7 263 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 ZNF799Q96GE5 643 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 RNF122Q9H9V4 155 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 TMEM100Q9NV29 134 aa12.91□□□□□ -0.34
DDX55-209ENST00000542286 EFSO43281 561 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 TXNL1O43396 289 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 ADH6P28332 368 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 BLVRBP30043 206 aaPredicted RBP12.9□□□□□ -0.34
DDX55-209ENST00000542286 CLDN15P56746 228 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 SRYQ05066 204 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 FABP9Q0Z7S8 132 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 AKIRIN2Q53H80 203 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 DOK3Q7L591 496 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 GALNTL5Q7Z4T8 443 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 LYG2Q86SG7 212 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 SLC25A42Q86VD7 318 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 ABHD3Q8WU67 409 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 PRRT1Q99946 306 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 SLCO5A1Q9H2Y9 848 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 MMP26Q9NRE1 261 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 RCC2Q9P258 522 aaKnown RBP12.9□□□□□ -0.34
DDX55-209ENST00000542286 NXT1Q9UKK6 140 aaKnown RBP12.9□□□□□ -0.34
DDX55-209ENST00000542286 SHANK1Q9Y566 2161 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 FAM230AA0A1W2PPH8 454 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 FAM221AA4D161 298 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 PGAM2P15259 253 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 AIMP2Q13155 320 aaKnown RBP12.9□□□□□ -0.34
DDX55-209ENST00000542286 EXT1Q16394 746 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 C1orf210Q8IVY1 113 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 STOML3Q8TAV4 291 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 RHBDD1Q8TEB9 315 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 C14orf79Q96F83 325 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 NRIP2Q9BQI9 281 aa12.9□□□□□ -0.34
DDX55-209ENST00000542286 ZNF701Q9NV72 531 aaPredicted RBP12.9□□□□□ -0.34
DDX55-209ENST00000542286 CNOT1A5YKK6 2376 aaKnown RBP12.9□□□□□ -0.35
DDX55-209ENST00000542286 A0A1W2PPE3 182 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 C5orf51A6NDU8 294 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 NUDT19A8MXV4 375 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 CELA3AP09093 270 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 TPT1P13693 172 aaKnown RBP12.89□□□□□ -0.35
DDX55-209ENST00000542286 RGS19P49795 217 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 PJVKQ0ZLH3 352 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 TMEM200AQ86VY9 491 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 BAP18Q8IXM2 172 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 GJC3Q8NFK1 279 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 SGK3Q96BR1 496 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 PAPOLGQ9BWT3 736 aaKnown RBP12.89□□□□□ -0.35
DDX55-209ENST00000542286 C5orf66Q9H5L9 145 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 SH2D2AQ9NP31 389 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 KIAA1549Q9HCM3 1950 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 A0A0A6YYH2 397 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 A6NJ64 397 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 HPNP05981 417 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 GLRA1P23415 457 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 MEF2DQ14814 521 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 KCNG3Q8TAE7 436 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 TMEM54Q969K7 222 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 TMEM230Q96A57 120 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 HRH4Q9H3N8 390 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 SMCO4Q9NRQ5 59 aa12.89□□□□□ -0.35
DDX55-209ENST00000542286 TCFL5Q9UL49 500 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms