RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 STUB1Q9UNE7 303 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 VSIG4Q9Y279 399 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 ADAM18Q9Y3Q7 739 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 GMEB1Q9Y692 573 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 KMT2AQ03164 3969 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 ARRDC5A6NEK1 342 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 H0Y980 276 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 TOR1AO14656 332 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 ARPC1BO15143 372 aaKnown RBP7.33□□□□□ -1.24
YBX3-211ENST00000541351 TMEM11P17152 192 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 GPX2P18283 190 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 NOS3P29474 1203 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 OTX1P32242 354 aaPredicted RBP7.33□□□□□ -1.24
YBX3-211ENST00000541351 SLC15A1P46059 708 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 RPS6KA3P51812 740 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 EDDM3BP56851 147 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 FAM3AP98173 230 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 ZBED5Q49AG3 693 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 FAM122BQ7Z309 247 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 LINC00346Q8IVM7 164 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 TIGD4Q8IY51 512 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 MICU2Q8IYU8 434 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 GPR32P1Q8NGA4 272 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 REEP6Q96HR9 211 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 FAM110AQ9BQ89 295 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 RGCCQ9H4X1 137 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 KRCC1Q9NPI7 259 aaPredicted RBP7.33□□□□□ -1.24
YBX3-211ENST00000541351 MRPS28Q9Y2Q9 187 aaKnown RBP7.33□□□□□ -1.24
YBX3-211ENST00000541351 SH3GLB1Q9Y371 365 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 N6AMT1Q9Y5N5 214 aa7.33□□□□□ -1.24
YBX3-211ENST00000541351 TNCP24821 2201 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 SMIM23A6NLE4 172 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 RENP00797 406 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 IGHG4P01861 327 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 PRRX1P54821 245 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 GNG3P63215 75 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 EIF2B1Q14232 305 aaKnown RBP7.32□□□□□ -1.24
YBX3-211ENST00000541351 FGD3Q5JSP0 725 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 RRM2BQ7LG56 351 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 RNF113BQ8IZP6 322 aaKnown RBP7.32□□□□□ -1.24
YBX3-211ENST00000541351 ABHD12Q8N2K0 398 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 ASCC1Q8N9N2 400 aaKnown RBP7.32□□□□□ -1.24
YBX3-211ENST00000541351 OR4D11Q8NGI4 311 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 OR5P3Q8WZ94 311 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 KCNJ15Q99712 375 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 PPP1R3EQ9H7J1 279 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 PNRC2Q9NPJ4 139 aaKnown RBP7.32□□□□□ -1.24
YBX3-211ENST00000541351 SDR39U1Q9NRG7 319 aaPredicted RBP7.32□□□□□ -1.24
YBX3-211ENST00000541351 AMMECR1Q9Y4X0 333 aaPredicted RBP7.32□□□□□ -1.24
YBX3-211ENST00000541351 LINC00312Q9Y6C7 94 aa7.32□□□□□ -1.24
YBX3-211ENST00000541351 KIAA2026Q5HYC2 2103 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 SHISA3A0PJX4 238 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 K7N7A8 449 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 NDUFB8O95169 186 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 NDUFB2O95178 105 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 IFNA14P01570 189 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 SLC1A6P48664 564 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 GSK3AP49840 483 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 STX1BP61266 288 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 VSNL1P62760 191 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 GRB2P62993 217 aaKnown RBP7.31□□□□□ -1.24
YBX3-211ENST00000541351 PRDX4Q13162 271 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 PIN1Q13526 163 aaPredicted RBP7.31□□□□□ -1.24
YBX3-211ENST00000541351 TSPYL5Q86VY4 417 aaPredicted RBP7.31□□□□□ -1.24
YBX3-211ENST00000541351 ZDHHC21Q8IVQ6 265 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 NRMQ8IXM6 262 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 ZNF454Q8N9F8 522 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 TRMT10AQ8TBZ6 339 aaKnown RBP7.31□□□□□ -1.24
YBX3-211ENST00000541351 RPEQ96AT9 228 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 OR10A2Q9H208 303 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 PLEKHA1Q9HB21 404 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 RETNQ9HD89 108 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 LIN7CQ9NUP9 197 aaKnown RBP7.31□□□□□ -1.24
YBX3-211ENST00000541351 HAO1Q9UJM8 370 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 TMEM5Q9Y2B1 443 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 POLDIP2Q9Y2S7 368 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 RHBDD3Q9Y3P4 386 aa7.31□□□□□ -1.24
YBX3-211ENST00000541351 hCG_38984A0A1B0GV85 526 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 MAGEA13PA6NCF6 341 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 ZNF850A8MQ14 1090 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 LINC01619G3V211 115 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 I3L521 148 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 SOCS2O14508 198 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 SDHDO14521 159 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 SHOXO15266 292 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 ITM2AO43736 263 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 NXPH2O95156 264 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 CST4P01036 141 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 ANXA2P07355 339 aaKnown RBP7.3□□□□□ -1.24
YBX3-211ENST00000541351 FASP25445 335 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 PSMB8P28062 276 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 HSD11B1P28845 292 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 DCTDP32321 178 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 OR1E2P47887 323 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 GPM6AP51674 278 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 PRKXP51817 358 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 ZP1P60852 638 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 PRKCDQ05655 676 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 TPTE2P1Q5T6R2 138 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms