RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 KRT7P08729 469 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 PABPC4LP0CB38 370 aaKnown RBP2.05□□□□□ -2.08
RAP1B-224ENST00000541216 DUX4L2P0CJ85 424 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 DUX4L3P0CJ86 424 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 DUX4L5P0CJ88 424 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 DUX4L6P0CJ89 424 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 DUX4L7P0CJ90 424 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 TROVE2P10155 538 aaKnown RBP eCLIP2.05□□□□□ -2.08
RAP1B-224ENST00000541216 IL1RNP18510 177 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 RPS23P62266 143 aaKnown RBP2.05□□□□□ -2.08
RAP1B-224ENST00000541216 RPL23P62829 140 aaKnown RBP2.05□□□□□ -2.08
RAP1B-224ENST00000541216 IFT88Q13099 833 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 C1orf185Q5T7R7 199 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 ADNP2Q6IQ32 1131 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 ZYG11AQ6WRX3 759 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 TAS2R42Q7RTR8 314 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 CDH26Q8IXH8 852 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 TMEM256Q8N2U0 113 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 LRRC52Q8N7C0 313 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 CAPSLQ8WWF8 208 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 ING5Q8WYH8 240 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 FGF13Q92913 245 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 RNF145Q96MT1 663 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 DUX4Q9UBX2 424 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 SLC17A4Q9Y2C5 497 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 CBY1Q9Y3M2 126 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 MED13LQ71F56 2210 aa2.05□□□□□ -2.08
RAP1B-224ENST00000541216 ASCC3Q8N3C0 2202 aaKnown RBP2.05□□□□□ -2.08
RAP1B-224ENST00000541216 IGHV3OR16-8A0A075B7F1 116 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 TRAV19A0A0A6YYK7 116 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 VGLL3A8MV65 326 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 GLSO94925 669 aaPredicted RBP2.04□□□□□ -2.08
RAP1B-224ENST00000541216 SFTPCP11686 197 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 RYR1P21817 5038 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 COL8A2P25067 703 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 OR1E1P30953 314 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 RRM2P31350 389 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 CD52P31358 61 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 EIF3EP60228 445 aaKnown RBP2.04□□□□□ -2.08
RAP1B-224ENST00000541216 TGM3Q08188 693 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 HES3Q5TGS1 186 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 GUSBP11Q6P575 273 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 MBOAT2Q6ZWT7 520 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 NKAIN4Q8IVV8 208 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 TTLQ8NG68 377 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 OR11H7Q8NGC8 314 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 ITFG1Q8TB96 612 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 APH1BQ8WW43 257 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 SLC38A4Q969I6 547 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 ZNF317Q96PQ6 595 aaPredicted RBP2.04□□□□□ -2.08
RAP1B-224ENST00000541216 WNK1Q9H4A3 2382 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 PLXNA4Q9HCM2 1894 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 SLC17A7Q9P2U7 560 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 PITPNC1Q9UKF7 332 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 PLXNB3Q9ULL4 1909 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 SCN10AQ9Y5Y9 1956 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 MYO16Q9Y6X6 1858 aa2.04□□□□□ -2.08
RAP1B-224ENST00000541216 BSNQ9UPA5 3926 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 SIPA1L1O43166 1804 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 ANK2Q01484 3957 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 C9JVG2 144 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 H7C1H1 209 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 PLPP1O14494 284 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 IGHV3-11P01762 117 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 OTX1P32242 354 aaPredicted RBP2.03□□□□□ -2.08
RAP1B-224ENST00000541216 RBM34P42696 430 aaKnown RBP2.03□□□□□ -2.08
RAP1B-224ENST00000541216 TRAM2Q15035 370 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 FAM222AQ5U5X8 452 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 LRRC66Q68CR7 880 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 H3F3CQ6NXT2 135 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 CMC1Q7Z7K0 106 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 CALHM3Q86XJ0 350 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 KRTAP13-1Q8IUC0 172 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 ZNF101Q8IZC7 436 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 SLC35G3Q8N808 338 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 RSG1Q9BU20 258 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 ENOPH1Q9UHY7 261 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 ATG2BQ96BY7 2078 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 TACC2O95359 2948 aa2.03□□□□□ -2.08
RAP1B-224ENST00000541216 VPS13CQ709C8 3753 aa2.03□□□□□ -2.09
RAP1B-224ENST00000541216 KIAA1671Q9BY89 1806 aa2.03□□□□□ -2.09
RAP1B-224ENST00000541216 TENM1Q9UKZ4 2725 aa2.03□□□□□ -2.09
RAP1B-224ENST00000541216 RYR2Q92736 4967 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 IGHV1-69DA0A0B4J2H0 117 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 SMCO3A2RU48 225 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 A6NDN8 102 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 OR5H1A6NKK0 313 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 GABRR3A8MPY1 467 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 UBXN8O00124 270 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 OR2F2O95006 317 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 SMIM10L2AP0DMW4 78 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 SMIM10L2BP0DMW5 78 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 PBLDP30039 288 aaPredicted RBP2.02□□□□□ -2.09
RAP1B-224ENST00000541216 DGCR6Q14129 220 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 ALKBH6Q3KRA9 238 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 TEX30Q5JUR7 227 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 ARMC12Q5T9G4 340 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 MRPL55Q7Z7F7 128 aaKnown RBP2.02□□□□□ -2.09
RAP1B-224ENST00000541216 FAM71AQ8IYT1 594 aa2.02□□□□□ -2.09
RAP1B-224ENST00000541216 DEFB119Q8N690 84 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms