RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 OR8U9P0C7N5 309 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 ID4P47928 161 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 AFF3P51826 1226 aaKnown RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 ZNF133P52736 654 aaPredicted RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 SWI5Q1ZZU3 235 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 RSPO1Q2MKA7 263 aaPredicted RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 RPUSD3Q6P087 351 aaKnown RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 DTX1Q86Y01 620 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 FADS6Q8N9I5 356 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 CCDC54Q8NEL0 328 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 OR9K2Q8NGE7 335 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 OR8U1Q8NH10 309 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 SLC22A8Q8TCC7 542 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 AKR1E2Q96JD6 320 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 USB1Q9BQ65 265 aaKnown RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 NELFAQ9H3P2 528 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 ANXA10Q9UJ72 324 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 FBXO9Q9UK97 447 aaPredicted RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 PADI1Q9ULC6 663 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 KPTNQ9Y664 436 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 TOX3O15405 576 aaPredicted RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 GABRR1P24046 479 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 HIST1H3AP68431 136 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 ENDOGQ14249 297 aaKnown RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 C10orf128Q5T292 105 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 HIST2H3PS2Q5TEC6 136 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 HIST2H3AQ71DI3 136 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 TMEM54Q969K7 222 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 MRPL24Q96A35 216 aaKnown RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 PIGQQ9BRB3 760 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 ARV1Q9H2C2 271 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 COLQQ9Y215 455 aaPredicted RBP10.75□□□□□ -0.69
NPC1-202ENST00000540608 STARD10Q9Y365 291 aa10.75□□□□□ -0.69
NPC1-202ENST00000540608 OR5H15A6NDH6 313 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 DKK1O94907 266 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 CSNK1A1P48729 337 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 RAB5BP61020 215 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 HABP2Q14520 560 aaPredicted RBP10.74□□□□□ -0.69
NPC1-202ENST00000540608 SHBQ15464 509 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 FOXL2NBQ6ZUU3 175 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 DNASE2BQ8WZ79 361 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 PIGTQ969N2 578 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 SPACA9Q96E40 222 aaPredicted RBP10.74□□□□□ -0.69
NPC1-202ENST00000540608 Q96M66 194 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 OR6C1Q96RD1 312 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 SMIM3Q9BZL3 60 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 FAM212BQ9NTI7 297 aaPredicted RBP10.74□□□□□ -0.69
NPC1-202ENST00000540608 LSM5Q9Y4Y9 91 aaKnown RBP10.74□□□□□ -0.69
NPC1-202ENST00000540608 OR5H8P0DN80 308 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 OTX1P32242 354 aaPredicted RBP10.74□□□□□ -0.69
NPC1-202ENST00000540608 H3F3AP84243 136 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 PHYHD1Q5SRE7 291 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 COMMD1Q8N668 190 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 SECTM1Q8WVN6 248 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 RASL10BQ96S79 203 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 HDHD3Q9BSH5 251 aaPredicted RBP10.74□□□□□ -0.69
NPC1-202ENST00000540608 KCNIP3Q9Y2W7 256 aa10.74□□□□□ -0.69
NPC1-202ENST00000540608 ASCC3Q8N3C0 2202 aaKnown RBP10.74□□□□□ -0.69
NPC1-202ENST00000540608 E5RGE8 158 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 UCP2P55851 309 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 NABP1Q96AH0 204 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 C14orf79Q96F83 325 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 CLCC1Q96S66 551 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 NSG2Q9Y328 171 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 VPS13AQ96RL7 3174 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 MSTNO14793 375 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 SCRG1O75711 98 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 TSPAN15O95858 294 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 SEC11BP0C7V7 166 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 PTAFRP25105 342 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 SNCAP37840 140 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 PIGPP57054 158 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 HGFACQ04756 655 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 RNF212Q495C1 297 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 LCN10Q6JVE6 187 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 KDF1Q8NAX2 398 aaPredicted RBP10.73□□□□□ -0.69
NPC1-202ENST00000540608 ERGIC1Q969X5 290 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 FAAP24Q9BTP7 215 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 LIME1Q9H400 295 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 HSF4Q9ULV5 492 aa10.73□□□□□ -0.69
NPC1-202ENST00000540608 MRPS17Q9Y2R5 130 aaKnown RBP10.73□□□□□ -0.69
NPC1-202ENST00000540608 PRSS44E7EML9 344 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 M0R135 149 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 EIF3GO75821 320 aaKnown RBP eCLIP10.72□□□□□ -0.69
NPC1-202ENST00000540608 SCGB1D2O95969 90 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 MBPP02686 304 aaPredicted RBP10.72□□□□□ -0.69
NPC1-202ENST00000540608 DANCRP0C864 163 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 TMEM225BP0DP42 221 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 MTCP1P56278 107 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 PLXDC2Q6UX71 529 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 ETV3LQ6ZN32 361 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 LRRC18Q8N456 261 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 SGK3Q96BR1 496 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 ZNF799Q96GE5 643 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 DEFB126Q9BYW3 111 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 METTL9Q9H1A3 318 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 UBE2ZQ9H832 354 aaPredicted RBP10.72□□□□□ -0.69
NPC1-202ENST00000540608 NECAP2Q9NVZ3 263 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 FRYLO94915 3013 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 NCOA6Q14686 2063 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms