RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 CRYBA2P53672 197 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 EDDM3BP56851 147 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 PRDX4Q13162 271 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 PMS2P11Q13670 270 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 SNCBQ16143 134 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 ACSM6Q6P461 480 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 SMARCD3Q6STE5 483 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 IFT20Q8IY31 132 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 OR4C15Q8NGM1 316 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 ZNF596Q8TC21 504 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 LZICQ8WZA0 190 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 KCNJ15Q99712 375 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 COPS4Q9BT78 406 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 TUBA4BQ9H853 241 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 ABCB9Q9NP78 766 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 KRCC1Q9NPI7 259 aaPredicted RBP6.31□□□□□ -1.4
KLHL42-203ENST00000540301 NRIP3Q9NQ35 241 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 IER3IP1Q9Y5U9 82 aa6.31□□□□□ -1.4
KLHL42-203ENST00000540301 ARRDC5A6NEK1 342 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 BIRC5O15392 142 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 HSPA12AO43301 675 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 FGF16O43320 207 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 NDUFB2O95178 105 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 CFL1P23528 166 aaKnown RBP6.3□□□□□ -1.4
KLHL42-203ENST00000540301 IFNA8P32881 189 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 SMCPP49901 116 aaPredicted RBP6.3□□□□□ -1.4
KLHL42-203ENST00000540301 GPM6AP51674 278 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 CBX1P83916 185 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 BDH1Q02338 343 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 STX3Q13277 289 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 TAF13Q15543 124 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 SMIM21Q3B7S5 101 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 KLHL12Q53G59 568 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 LGALS9CQ6DKI2 356 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 CCDC144NLQ6NUI1 221 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 TCF23Q7RTU1 214 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 THNSL2Q86YJ6 484 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 ZDHHC21Q8IVQ6 265 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 TIGD4Q8IY51 512 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 ABHD12Q8N2K0 398 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 LINC00471Q8N535 108 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 HPSE2Q8WWQ2 592 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 PIGCQ92535 297 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 DLX4Q92988 240 aaPredicted RBP6.3□□□□□ -1.4
KLHL42-203ENST00000540301 HIST1H2AAQ96QV6 131 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 OR8B4Q96RC9 309 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 NRIP2Q9BQI9 281 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 TMED9Q9BVK6 235 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 OR51I2Q9H344 312 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.3□□□□□ -1.4
KLHL42-203ENST00000540301 BAG5Q9UL15 447 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 DSCAML1Q8TD84 2053 aa6.3□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A18PA6NE21 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A16PA6NEW6 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A20PA6NIJ5 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A9PA6NNJ1 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A12PA8MX19 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A5PA8MXJ8 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 ZNF732B4DXR9 585 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 I3L521 148 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 K7N7A8 449 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 PSMD9O00233 223 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 TXNDC12O95881 172 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 CST4P01036 141 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 ANXA2P07355 339 aaKnown RBP6.29□□□□□ -1.4
KLHL42-203ENST00000540301 OR8U9P0C7N5 309 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A15PP0C7V4 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A13PP0C7W8 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A14PP0C7W9 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 FAM90A24PP0C7X0 464 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 KITP10721 976 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 TMEM11P17152 192 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 CEACAM3P40198 252 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 RPS27P42677 84 aaKnown RBP6.29□□□□□ -1.4
KLHL42-203ENST00000540301 GPR12P47775 334 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 RPS6KA3P51812 740 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 ISL1P61371 349 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 ESRRGP62508 458 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 EIF2B1Q14232 305 aaKnown RBP6.29□□□□□ -1.4
KLHL42-203ENST00000540301 GFOD2Q3B7J2 385 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 TPTE2P1Q5T6R2 138 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 CEMP1Q6PRD7 247 aaPredicted RBP6.29□□□□□ -1.4
KLHL42-203ENST00000540301 ZNF730Q6ZMV8 503 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 GDPD3Q7L5L3 318 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 RTN4RL2Q86UN3 420 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 ZDHHC23Q8IYP9 409 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 RNF113BQ8IZP6 322 aaKnown RBP6.29□□□□□ -1.4
KLHL42-203ENST00000540301 AQP3Q92482 292 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 ARPC1AQ92747 370 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 CREB3L1Q96BA8 519 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 SPDL1Q96EA4 605 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 PRRC1Q96M27 445 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 OR4C12Q96R67 309 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 GPX7Q96SL4 187 aaPredicted RBP6.29□□□□□ -1.4
KLHL42-203ENST00000540301 NMNAT3Q96T66 252 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 MYCBPQ99417 103 aaPredicted RBP6.29□□□□□ -1.4
KLHL42-203ENST00000540301 GNB4Q9HAV0 340 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 RPRD1BQ9NQG5 326 aaKnown RBP6.29□□□□□ -1.4
KLHL42-203ENST00000540301 CENPMQ9NSP4 180 aa6.29□□□□□ -1.4
KLHL42-203ENST00000540301 MRPL22Q9NWU5 206 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms