RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 AANATQ16613 207 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 LRRC75BQ2VPJ9 315 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 ZNF322Q6U7Q0 402 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-211ENST00000539843 ACP7Q6ZNF0 438 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 KRT74Q7RTS7 529 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 HS3ST5Q8IZT8 346 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 POC1AQ8NBT0 407 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 OR5K1Q8NHB7 308 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 OR2T6Q8NHC8 308 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 SSX3Q99909 188 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 ELL3Q9HB65 397 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-211ENST00000539843 USE1Q9NZ43 259 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 ZNF222Q9UK12 451 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 MAB21L2Q9Y586 359 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 TRRAPQ9Y4A5 3859 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 RFPL4AA6NLU0 287 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 RFPL4AL1F8VTS6 287 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 DLGAP1O14490 977 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 HCCSP53701 268 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 ERVFRD-1P60508 538 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 GID4Q8IVV7 300 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 SLC35F2Q8IXU6 374 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 PNKDQ8N490 385 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 TTTY10Q9BZA0 68 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 NPFFR1Q9GZQ6 430 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 RANBP3Q9H6Z4 567 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-211ENST00000539843 KRT84Q9NSB2 600 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 FBLN5Q9UBX5 448 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 SLC7A11Q9UPY5 501 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 SNX5Q9Y5X3 404 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 R4GMQ9 66 aa12.5□□□□□ -0.41
UBE3B-211ENST00000539843 DHRS7CA6NNS2 312 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 H3BUI4 141 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 TFF1P04155 84 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 KRT8P05787 483 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 PRDX2P32119 198 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 DLX1P56177 255 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 CXCR4P61073 352 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 HERPUD1Q15011 391 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 PTGES3Q15185 160 aaKnown RBP12.49□□□□□ -0.41
UBE3B-211ENST00000539843 NXNL2Q5VZ03 156 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 SLC35E4Q6ICL7 350 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 ASRGL1Q7L266 308 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 MEPCEQ7L2J0 689 aaKnown RBP12.49□□□□□ -0.41
UBE3B-211ENST00000539843 FAM110DQ8TAY7 271 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-211ENST00000539843 ADI1Q9BV57 179 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 FGF23Q9GZV9 251 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-211ENST00000539843 ABCB10Q9NRK6 738 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 OR14J1Q9UGF5 321 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 OR52A1Q9UKL2 312 aa12.49□□□□□ -0.41
UBE3B-211ENST00000539843 TCRBV3S1A0A5B6 114 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 CCDC182A6NF36 153 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 GATBO75879 557 aaKnown RBP12.48□□□□□ -0.41
UBE3B-211ENST00000539843 DNAJC8O75937 253 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-211ENST00000539843 PGA5P0DJD9 388 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 KRTAP10-3P60369 221 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 LY6EQ16553 131 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 CALHM1Q8IU99 346 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 ELMOD2Q8IZ81 293 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 OR2T27Q8NH04 317 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 FOXRED1Q96CU9 486 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-211ENST00000539843 MEGF9Q9H1U4 602 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 GPR173Q9NS66 373 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 C19orf12Q9NSK7 152 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 CLN6Q9NWW5 311 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 COPS3Q9UNS2 423 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 POMPQ9Y244 141 aa12.48□□□□□ -0.41
UBE3B-211ENST00000539843 PKD1L1Q8TDX9 2849 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 A0A0G2JK05 382 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 PRKYO43930 277 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 NOS1APO75052 506 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-211ENST00000539843 SERPINA3P01011 423 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 IGLV3-1P01715 115 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 TTRP02766 147 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 COX7A1P24310 79 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 ATP6V1E1P36543 226 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-211ENST00000539843 DMRTC1Q5HYR2 192 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 FAHD1Q6P587 224 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 ZDHHC13Q8IUH4 622 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 TCEANCQ8N8B7 351 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 YIPF7Q8N8F6 280 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 ASCC1Q8N9N2 400 aaKnown RBP12.47□□□□□ -0.41
UBE3B-211ENST00000539843 CCDC54Q8NEL0 328 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 OR13D1Q8NGV5 346 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 TMEM163Q8TC26 289 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 PKIBQ9C010 78 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 PITPNC1Q9UKF7 332 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 V9GYS6 101 aa12.47□□□□□ -0.41
UBE3B-211ENST00000539843 PQLC2LA1A4F0 135 aa12.46□□□□□ -0.41
UBE3B-211ENST00000539843 G3V2T6 193 aa12.46□□□□□ -0.41
UBE3B-211ENST00000539843 PEX14O75381 377 aa12.46□□□□□ -0.41
UBE3B-211ENST00000539843 TSPAN15O95858 294 aa12.46□□□□□ -0.41
UBE3B-211ENST00000539843 CYB5AP00167 134 aa12.46□□□□□ -0.41
UBE3B-211ENST00000539843 TK1P04183 234 aa12.46□□□□□ -0.41
UBE3B-211ENST00000539843 KIR2DS4P43632 304 aa12.46□□□□□ -0.41
UBE3B-211ENST00000539843 RASSF2P50749 326 aa12.46□□□□□ -0.41
UBE3B-211ENST00000539843 TMEM200BQ69YZ2 307 aa12.46□□□□□ -0.41
UBE3B-211ENST00000539843 GDPD3Q7L5L3 318 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms