RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ITPR1Q14643 2758 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 IGKV1-9A0A0C4DH69 117 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 SHISA3A0PJX4 238 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 DPRXA6NFQ7 191 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 A6NLC8 198 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 TMEM14DPA8MWL7 114 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 GABARAPH6UMI1 98 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 CDC14BO60729 498 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 NOS1APO75052 506 aaPredicted RBP10.08□□□□□ -0.8
VTN-202ENST00000539746 THBDP07204 575 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 CD55P08174 381 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 CSF1P09603 554 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 OR4A8P0C604 315 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 MGMTP16455 207 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 TBPP20226 339 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 PRSS3P35030 304 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 RCVRNP35243 200 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 CFHR2P36980 270 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 GATA4P43694 442 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 KCNJ3P48549 501 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 MMP15P51511 669 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 CAV3P56539 151 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 RPS27AP62979 156 aaKnown RBP10.08□□□□□ -0.8
VTN-202ENST00000539746 IGFBP7Q16270 282 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 ZNF672Q499Z4 452 aaPredicted RBP10.08□□□□□ -0.8
VTN-202ENST00000539746 ACTBL2Q562R1 376 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 VHLLQ6RSH7 139 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 DMRTC2Q8IXT2 367 aaPredicted RBP10.08□□□□□ -0.8
VTN-202ENST00000539746 OR8H2Q8N162 312 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 NPRL2Q8WTW4 380 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 RAB3CQ96E17 227 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 GAL3ST1Q99999 423 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 RAB1BQ9H0U4 201 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 OR51I2Q9H344 312 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 SEBOXQ9HB31 216 aaPredicted RBP10.08□□□□□ -0.8
VTN-202ENST00000539746 CISD1Q9NZ45 108 aaKnown RBP10.08□□□□□ -0.8
VTN-202ENST00000539746 HSF4Q9ULV5 492 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 ATMQ13315 3056 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 CELSR3Q9NYQ7 3312 aa10.08□□□□□ -0.8
VTN-202ENST00000539746 INTS1Q8N201 2190 aaKnown RBP10.08□□□□□ -0.8
VTN-202ENST00000539746 TPRP12270 2363 aaKnown RBP10.07□□□□□ -0.8
VTN-202ENST00000539746 TMEM272A0A1B0GTI8 110 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 FUOMA2VDF0 154 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 NAP1L6A6NFF2 107 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 GSTZ1O43708 216 aaPredicted RBP10.07□□□□□ -0.8
VTN-202ENST00000539746 CTAG2O75638 210 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 RBBP9O75884 186 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 MPIG6BO95866 241 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 LPLP06858 475 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 ELK1P19419 428 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 MDH2P40926 338 aaKnown RBP10.07□□□□□ -0.8
VTN-202ENST00000539746 MAGEB1P43366 347 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 UQCRFS1P47985 274 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 PPOXP50336 477 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 FGF12P61328 243 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 RGS21Q2M5E4 152 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 HAGHLQ6PII5 290 aaPredicted RBP10.07□□□□□ -0.8
VTN-202ENST00000539746 C20orf204Q6ZNR8 217 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 SLC25A26Q70HW3 274 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 PEG10Q86TG7 708 aaKnown RBP10.07□□□□□ -0.8
VTN-202ENST00000539746 LYPD6Q86Y78 171 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 Q8NFD4 153 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 OR2Z1Q8NG97 314 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 OR4D6Q8NGJ1 314 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 OR10R2Q8NGX6 335 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 SLC25A28Q96A46 364 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 RFT1Q96AA3 541 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 PIK3IP1Q96FE7 263 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 COX4I2Q96KJ9 171 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 TMEM204Q9BSN7 226 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 TM2D1Q9BX74 207 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 TLNRD1Q9H1K6 362 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 COPZ2Q9P299 210 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 CACNA1CQ13936 2221 aa10.07□□□□□ -0.8
VTN-202ENST00000539746 BOD1L1Q8NFC6 3051 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 ZGRF1Q86YA3 2104 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 SMIM30A4D0T7 59 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 A6NIN4 97 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 SH2D1BO14796 132 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 LDLRAD4O15165 306 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 LMX1BO60663 402 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 UPK1BO75841 260 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 NXPH2O95156 264 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 HTR3BO95264 441 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 PTBP3O95758 552 aaKnown RBP10.06□□□□□ -0.8
VTN-202ENST00000539746 PAHP00439 452 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 SERPINA2P20848 420 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 OR3A4PP47883 348 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 GNG2P59768 71 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 ZP1P60852 638 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 MRPS11P82912 194 aaKnown RBP10.06□□□□□ -0.8
VTN-202ENST00000539746 TNFAIP6P98066 277 aaPredicted RBP10.06□□□□□ -0.8
VTN-202ENST00000539746 TNK1Q13470 666 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 ADIPOQQ15848 244 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 NCCRP1Q6ZVX7 275 aaPredicted RBP10.06□□□□□ -0.8
VTN-202ENST00000539746 MYPOPQ86VE0 399 aaPredicted RBP10.06□□□□□ -0.8
VTN-202ENST00000539746 NR2C2APQ86WQ0 139 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 CMTM4Q8IZR5 234 aa10.06□□□□□ -0.8
VTN-202ENST00000539746 FAM58AQ8N1B3 248 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms