RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 A0A0A6YYH2 397 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 A6NJ64 397 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 B9A039 149 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 E7EQL1 145 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 SPRY1O43609 319 aaPredicted RBP13.13□□□□□ -0.31
VAMP1-207ENST00000539047 HTR3BO95264 441 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 MPIG6BO95866 241 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 GRPP07492 148 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 VSIG8P0DPA2 414 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 NAT2P11245 290 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 GTF2F2P13984 249 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 IL24Q13007 206 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 EFNB3Q15768 340 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 TMEM69Q5SWH9 247 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 FIP1L1Q6UN15 594 aaKnown RBP13.13□□□□□ -0.31
VAMP1-207ENST00000539047 CDH24Q86UP0 819 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 Q8IYB0 196 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 FBXW5Q969U6 566 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 SLC25A38Q96DW6 304 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 TMEM204Q9BSN7 226 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 RHOFQ9HBH0 211 aa13.13□□□□□ -0.31
VAMP1-207ENST00000539047 MYEF2Q9P2K5 600 aaKnown RBP13.13□□□□□ -0.31
VAMP1-207ENST00000539047 USP9XQ93008 2570 aaPredicted RBP13.13□□□□□ -0.31
VAMP1-207ENST00000539047 A0A1B0GWJ7 208 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 WIPF3A6NGB9 483 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 ZSCAN5BA6NJL1 495 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 TMEM14DPA8MWL7 114 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 F5H5P2 479 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 MLNRO43193 412 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 TPD52L2O43399 206 aaKnown RBP13.12□□□□□ -0.31
VAMP1-207ENST00000539047 SPRY3O43610 288 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 ANGPTL7O43827 346 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 CDC14BO60729 498 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 MGMTP16455 207 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 IGFBP2P18065 325 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 CPT2P23786 658 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 CD40LGP29965 261 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 CD200P41217 278 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 PITPNBP48739 271 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 TNFAIP6P98066 277 aaPredicted RBP13.12□□□□□ -0.31
VAMP1-207ENST00000539047 MSMPQ1L6U9 139 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 PYDC2Q56P42 97 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 TMEM255AQ5JRV8 349 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 TMEM200AQ86VY9 491 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 CMTM4Q8IZR5 234 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 CELF2-AS1Q8N7Q2 184 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 OR4M1Q8NGD0 313 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 BORCS5Q969J3 196 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 MRPS24Q96EL2 167 aaKnown RBP13.12□□□□□ -0.31
VAMP1-207ENST00000539047 EGLN1Q9GZT9 426 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 OR51I2Q9H344 312 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 MS4A5Q9H3V2 200 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 KCNK15Q9H427 330 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 FN3KRPQ9HA64 309 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 DOPEY2Q9Y3R5 2298 aa13.12□□□□□ -0.31
VAMP1-207ENST00000539047 USP9YO00507 2555 aaPredicted RBP13.11□□□□□ -0.31
VAMP1-207ENST00000539047 hCG_1807616A0A1W2PRN6 198 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 H0YL77 283 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 H3BUI4 141 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 C19orf84I3L1E1 186 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 LDLRAD4O15165 306 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 TPPPO94811 219 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 TNFRSF1AP19438 455 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 DAZAP2Q15038 168 aaPredicted RBP13.11□□□□□ -0.31
VAMP1-207ENST00000539047 PCGF3Q3KNV8 242 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 PYHIN1Q6K0P9 492 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 C16orf87Q6PH81 154 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 Q6ZR03 302 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 CALHM1Q8IU99 346 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 MFSD4AQ8N468 514 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 SCCPDHQ8NBX0 429 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 OR56B1Q8NGI3 324 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 SLAMF9Q96A28 289 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 SELENOIQ9C0D9 397 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 IL19Q9UHD0 177 aa13.11□□□□□ -0.31
VAMP1-207ENST00000539047 A6NNC1 897 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 SIAH2O43255 324 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 CTAG2O75638 210 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 CHRM2P08172 466 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 CDK2P24941 298 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 MPZP25189 248 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 MNDAP41218 407 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 INPP1P49441 399 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 PPP5CP53041 499 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 RPS27AP62979 156 aaKnown RBP13.1□□□□□ -0.31
VAMP1-207ENST00000539047 ZNF154Q13106 437 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 UNC119Q13432 240 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 ARL6IP1Q15041 203 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 TESK1Q15569 626 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 AGAP6Q5VW22 663 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 OR10K2Q6IF99 312 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 ASCL4Q6XD76 172 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 RNF144BQ7Z419 303 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 OSR2Q8N2R0 312 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 MUC15Q8N387 334 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 GDPD1Q8N9F7 314 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 OR51T1Q8NGJ9 327 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 OR11L1Q8NGX0 322 aa13.1□□□□□ -0.31
VAMP1-207ENST00000539047 OR10K1Q8NGX5 313 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms