RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 MELTFP08582 738 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 ARR3P36575 388 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 HAAOP46952 286 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 BAMBIQ13145 260 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 RTL6Q6ICC9 239 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 LIN54Q6MZP7 749 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 TMEM53Q6P2H8 277 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 OR56B1Q8NGI3 324 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 SPSB4Q96A44 273 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 FN3KRPQ9HA64 309 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 SCPEP1Q9HB40 452 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 FBLN5Q9UBX5 448 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 KCNN3Q9UGI6 736 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 VSIG4Q9Y279 399 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 SULT1C2O00338 296 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 HSPB6O14558 160 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 OPRM1P35372 400 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 CNN3Q15417 329 aaKnown RBP12.15□□□□□ -0.46
ACTN1-205ENST00000538545 C4orf46Q504U0 113 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 SLC36A1Q7Z2H8 476 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 TCTE3Q8IZS6 198 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 SLAMF9Q96A28 289 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 APOBEC3DQ96AK3 386 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-205ENST00000538545 OR2J1Q9GZK6 312 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 PLSCR2Q9NRY7 297 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 PLEKHJ1Q9NW61 149 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 TNFSF13O75888 250 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 SERPINA5P05154 406 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 CHRM2P08172 466 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 PDZK1IP1Q13113 114 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 GUSBP1Q15486 140 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 ATPAF1Q5TC12 328 aaPredicted RBP12.15□□□□□ -0.47
ACTN1-205ENST00000538545 FAM89BQ8N5H3 189 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 OR4K15Q8NH41 348 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 SPSB1Q96BD6 273 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 Q96M66 194 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 TMEM246Q9BRR3 403 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 IRF2BPLQ9H1B7 796 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 NPDC1Q9NQX5 325 aaPredicted RBP12.15□□□□□ -0.47
ACTN1-205ENST00000538545 PRR13Q9NZ81 148 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 MGAT4CQ9UBM8 478 aa12.15□□□□□ -0.47
ACTN1-205ENST00000538545 CACNA1DQ01668 2161 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 A0A1B0GUH1 482 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 CD300LBA8K4G0 201 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 FOXI3A8MTJ6 420 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-205ENST00000538545 ATP6V1G1O75348 118 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 SULT1A3P0DMM9 295 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 SULT1A4P0DMN0 295 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 CA6P23280 308 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 GZMKP49863 264 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 UBE2NP61088 152 aaKnown RBP12.14□□□□□ -0.47
ACTN1-205ENST00000538545 DAZAP2Q15038 168 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-205ENST00000538545 GABRA6Q16445 453 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 PRR30Q53SZ7 412 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-205ENST00000538545 CXorf67Q86X51 503 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-205ENST00000538545 C10orf35Q96D05 121 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 METTL9Q9H1A3 318 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 UBE2QL1A1L167 161 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 ZNF732B4DXR9 585 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 SYNGR1O43759 233 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 CD74P04233 296 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 ZNF14P17017 642 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-205ENST00000538545 PTGER4P35408 488 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 DCAF12L2Q5VW00 463 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 CD276Q5ZPR3 534 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 LAMTOR1Q6IAA8 161 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
ACTN1-205ENST00000538545 SULT4A1Q9BR01 284 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 RGCCQ9H4X1 137 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 ST3GAL6Q9Y274 331 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 FAM215AQ9Y5M1 114 aa12.14□□□□□ -0.47
ACTN1-205ENST00000538545 TMEM82A0PJX8 343 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 FAM172BPA6NC97 362 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 TSC22D2O75157 780 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 TPPPO94811 219 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 BCL3P20749 454 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 ALDH3B1P43353 468 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 NPY4RP50391 375 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 CAPZA1P52907 286 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 MALLQ13021 153 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 METTL11BQ5VVY1 283 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 Q6ZT83 130 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 NLRC3Q7RTR2 1065 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 CDH26Q8IXH8 852 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 ADAD2Q8NCV1 583 aaKnown RBP12.13□□□□□ -0.47
ACTN1-205ENST00000538545 STARD4Q96DR4 205 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 HSPB11Q9Y547 144 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 PIEZO1Q92508 2521 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 DHRS7CA6NNS2 312 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 ALX3O95076 343 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 UBBP0CG47 229 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 PRKACBP22694 351 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 CPT2P23786 658 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 FUT6P51993 359 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 ATP1B3P54709 279 aa12.13□□□□□ -0.47
ACTN1-205ENST00000538545 RAG2P55895 527 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms