RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 MEOX1P50221 254 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 SRYQ05066 204 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 PMPCAQ10713 525 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 SRSF6Q13247 344 aaKnown RBP9.37□□□□□ -0.91
CLIP1-210ENST00000538120 SLC22A6Q4U2R8 563 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 CRIP3Q6Q6R5 217 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 STX12Q86Y82 276 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 KCNRGQ8N5I3 272 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 OR2C3Q8N628 320 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 OR1S2Q8NGQ3 325 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 OR13C8Q8NGS7 320 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 FGFBP3Q8TAT2 258 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 SSC4DQ8WTU2 575 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM45BQ96B21 275 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 SPACA5Q96QH8 159 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 SLC6A7Q99884 636 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 PDCD10Q9BUL8 212 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 ALX4Q9H161 411 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-210ENST00000538120 GPR35Q9HC97 309 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 TNFSF18Q9UNG2 199 aa9.37□□□□□ -0.91
CLIP1-210ENST00000538120 NOP16Q9Y3C1 178 aaKnown RBP9.37□□□□□ -0.91
CLIP1-210ENST00000538120 OTOGLQ3ZCN5 2332 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 A0A0U1RQV5 110 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM235A6NFC5 223 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 SYNGR3O43761 229 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 LRP3O75074 770 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 CD8AP01732 235 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 HLA-AP01891 365 aaKnown RBP9.36□□□□□ -0.91
CLIP1-210ENST00000538120 PATE4P0C8F1 98 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 B4GALT1P15291 398 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 CAPZA1P52907 286 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 TAS2R19P59542 299 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 HGFACQ04756 655 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 CEACAM16Q2WEN9 425 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 KRTAP27-1Q3LI81 207 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 PABPC1L2AQ5JQF8 200 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 RIPPLY2Q5TAB7 128 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 C11orf87Q6NUJ2 197 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 UNQ6126/PRO20091Q6UXV3 157 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 BPIFB2Q8N4F0 458 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 PPP1R1CQ8WVI7 109 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 C1orf147Q96MC9 270 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-210ENST00000538120 ASCL3Q9NQ33 180 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 PLEK2Q9NYT0 353 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 KLK13Q9UKR3 277 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 RAB22AQ9UL26 194 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 VSIG4Q9Y279 399 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 PLEKHA6Q9Y2H5 1048 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 V9GYS6 101 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 MED13Q9UHV7 2174 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 A0A0A6YYH2 397 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 A0A0D9SG52 128 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 KANTRA0A1W2PQU2 76 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 A6NJ64 397 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 MPTX1A8MV57 137 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 M0R135 149 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 RAB27BO00194 218 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 SNRNP70P08621 437 aaKnown RBP9.36□□□□□ -0.91
CLIP1-210ENST00000538120 CD82P27701 267 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 CD34P28906 385 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF93P35789 620 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-210ENST00000538120 ACTBP60709 375 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 PPIAP62937 165 aaKnown RBP9.36□□□□□ -0.91
CLIP1-210ENST00000538120 ACTG1P63261 375 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 RAB35Q15286 201 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 GUCA2BQ16661 112 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 SNAI3Q3KNW1 292 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF774Q6NX45 483 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 PGAP1Q75T13 922 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 ANGPTL5Q86XS5 388 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 CCDC107Q8WV48 283 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 MRGPRFQ96AM1 343 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF799Q96GE5 643 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 FBLN5Q9UBX5 448 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 PCDHB10Q9UN67 800 aa9.36□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM14DPA8MWL7 114 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 SULT1C2O00338 296 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 BCL2L11O43521 198 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 SGCEO43556 437 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF32P17041 273 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 ADCYAP1P18509 176 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 SLC6A9P48067 706 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 SOX8P57073 446 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 SRSF3P84103 164 aaKnown RBP9.35□□□□□ -0.91
CLIP1-210ENST00000538120 PLGLB1Q02325 96 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 TSPO2Q5TGU0 170 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 RTN4RL2Q86UN3 420 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 VASH2Q86V25 355 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 PUSL1Q8N0Z8 303 aaKnown RBP9.35□□□□□ -0.91
CLIP1-210ENST00000538120 GVQW1Q8N7I0 195 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM229BQ8NBD8 167 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 ACBD4Q8NC06 268 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 PRSS33Q8NF86 280 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 CMBLQ96DG6 245 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 FOXB1Q99853 325 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 MICU1Q9BPX6 476 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 DNTTIP1Q9H147 329 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 PURGQ9UJV8 347 aaKnown RBP9.35□□□□□ -0.91
CLIP1-210ENST00000538120 KLF13Q9Y2Y9 288 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-210ENST00000538120 PRELID3BQ9Y3B1 194 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms