RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SGPP2Q8IWX5 399 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 C20orf196Q8IYI0 205 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 METTL9Q9H1A3 318 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 TLNRD1Q9H1K6 362 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 SH2D2AQ9NP31 389 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 HPF1Q9NWY4 346 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 FAM230AA0A1W2PPH8 454 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 SGCEO43556 437 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 CTSDP07339 412 aaPredicted RBP12.49□□□□□ -0.41
USP44-203ENST00000537435 CRYGSP22914 178 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 IL32P24001 234 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 C10orf91Q5T1B1 145 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 H3F3CQ6NXT2 135 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 MYO7BQ6PIF6 2116 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 PLXDC2Q6UX71 529 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 M1APQ8TC57 530 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 REEP6Q96HR9 211 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 FAAP24Q9BTP7 215 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 CNTNAP3Q9BZ76 1288 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 TAF9BQ9HBM6 251 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 ZNF581Q9P0T4 197 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 ANXA10Q9UJ72 324 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 CARHSP1Q9Y2V2 147 aaKnown RBP12.49□□□□□ -0.41
USP44-203ENST00000537435 LRP3O75074 770 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 RCC1P18754 421 aaPredicted RBP12.48□□□□□ -0.41
USP44-203ENST00000537435 HGFACQ04756 655 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 RSU1Q15404 277 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 OR2A2Q6IF42 318 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 HAGHLQ6PII5 290 aaPredicted RBP12.48□□□□□ -0.41
USP44-203ENST00000537435 RPS19BP1Q86WX3 136 aaKnown RBP12.48□□□□□ -0.41
USP44-203ENST00000537435 FNDC9Q8TBE3 224 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 SPSB1Q96BD6 273 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 UQCC1Q9NVA1 299 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 AK3Q9UIJ7 227 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 SIT1Q9Y3P8 196 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 PI4KAP42356 2102 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 C9J4A7 227 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 TAAR5O14804 337 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 SYNGR3O43761 229 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 F12P00748 615 aaPredicted RBP12.48□□□□□ -0.41
USP44-203ENST00000537435 OR5H8P0DN80 308 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 CCL4P13236 92 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 RRADP55042 308 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 EIF5AP63241 154 aaKnown RBP12.48□□□□□ -0.41
USP44-203ENST00000537435 SPEM2Q0P670 501 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 RAB35Q15286 201 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 ZNF468Q5VIY5 522 aaPredicted RBP12.48□□□□□ -0.41
USP44-203ENST00000537435 ZNF774Q6NX45 483 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 NTNG2Q96CW9 530 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 SMIM8Q96KF7 97 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 LIME1Q9H400 295 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 PADI1Q9ULC6 663 aa12.48□□□□□ -0.41
USP44-203ENST00000537435 WDR87Q6ZQQ6 2873 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 SDK2Q58EX2 2172 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 IGKV1-27A0A075B6S5 117 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 CRYM-AS1A6NIL9 109 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 CBR3O75828 277 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 GGNBP1Q5YKI7 109 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 CBLN2Q8IUK8 224 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 MRPL24Q96A35 216 aaKnown RBP12.47□□□□□ -0.41
USP44-203ENST00000537435 SAT2Q96F10 170 aaPredicted RBP12.47□□□□□ -0.41
USP44-203ENST00000537435 RHOFQ9HBH0 211 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 PILRBQ9UKJ0 227 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 EDARQ9UNE0 448 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 FAM96BQ9Y3D0 163 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 NSG1A0A0A6YYJ2 146 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 K7EPK0 472 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 MED6O75586 246 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 IFNA21P01568 189 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 NME2P22392 152 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 RPL12P30050 165 aaKnown RBP12.47□□□□□ -0.41
USP44-203ENST00000537435 NTF4P34130 210 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 OPRM1P35372 400 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 FLI1Q01543 452 aaPredicted RBP12.47□□□□□ -0.41
USP44-203ENST00000537435 EIF5AL1Q6IS14 154 aaKnown RBP12.47□□□□□ -0.41
USP44-203ENST00000537435 GPR137CQ8N3F9 429 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 FAM71E2Q8N5Q1 922 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 AGBL5Q8NDL9 886 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 CMSS1Q9BQ75 279 aaKnown RBP12.47□□□□□ -0.41
USP44-203ENST00000537435 SEC11CQ9BY50 192 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 CRLF2Q9HC73 371 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 DECR2Q9NUI1 292 aa12.47□□□□□ -0.41
USP44-203ENST00000537435 WDFY3Q8IZQ1 3526 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 CCDC187A0A096LP49 1063 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 DEDDO75618 318 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 ZNF205O95201 554 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 LCATP04180 440 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 H2AFB1P0C5Y9 115 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 PATE4P0C8F1 98 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 MUC1P15941 1255 aaPredicted RBP12.46□□□□□ -0.41
USP44-203ENST00000537435 LPAR6P43657 344 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 MLF1P58340 268 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 SMCO1Q147U7 214 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 CNN3Q15417 329 aaKnown RBP12.46□□□□□ -0.41
USP44-203ENST00000537435 PMS2CLQ68D20 193 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 YRDCQ86U90 279 aaKnown RBP12.46□□□□□ -0.41
USP44-203ENST00000537435 SPAG16Q8N0X2 631 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 NAXEQ8NCW5 288 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 OR1F12Q8NHA8 337 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 TOMM40LQ969M1 308 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms