RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 CBR3O75828 277 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 IGLV3-1P01715 115 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 GUCA1AP43080 201 aaPredicted RBP11.25□□□□□ -0.61
TRIM25-202ENST00000537230 RAC1P63000 192 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 HGFACQ04756 655 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 PLXDC2Q6UX71 529 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 KCNG3Q8TAE7 436 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 PIGTQ969N2 578 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 ULBP2Q9BZM5 246 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 MEX3AA1L020 520 aaKnown RBP11.24□□□□□ -0.61
TRIM25-202ENST00000537230 S100A6P06703 90 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 TCN2P20062 427 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 CTSSP25774 331 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 DUSP3P51452 185 aaPredicted RBP11.24□□□□□ -0.61
TRIM25-202ENST00000537230 SUCLG1P53597 346 aaKnown RBP11.24□□□□□ -0.61
TRIM25-202ENST00000537230 PDZK1IP1Q13113 114 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 RXFP4Q8TDU9 374 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 TMEM230Q96A57 120 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 ALKBH3Q96Q83 286 aaPredicted RBP11.24□□□□□ -0.61
TRIM25-202ENST00000537230 C5orf66Q9H5L9 145 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 ACKR4Q9NPB9 350 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 TCFL5Q9UL49 500 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 CACNA1HO95180 2353 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 PINLYPA6NC86 204 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 SNAPINO95295 136 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 CLDN15P56746 228 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 GGNQ86UU5 652 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 DEFB123Q8N688 67 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 OR51F2Q8NH61 342 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 OR14L1PQ8NHC6 308 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 GLYATL2Q8WU03 294 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 NMES1Q9C002 83 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 MMP26Q9NRE1 261 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 ZFP57Q9NU63 452 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 PIGLQ9Y2B2 252 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 SHANK1Q9Y566 2161 aa11.24□□□□□ -0.61
TRIM25-202ENST00000537230 CCDC187A0A096LP49 1063 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 M0R135 149 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 MUC1P15941 1255 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-202ENST00000537230 SERPINA2P20848 420 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 ACKR3P25106 362 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 OTX1P32242 354 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-202ENST00000537230 PTGFRP43088 359 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 ZNF133P52736 654 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-202ENST00000537230 ZXDAP98168 799 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 PJVKQ0ZLH3 352 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 TMEM128Q5BJH2 165 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 SLC23A3Q6PIS1 610 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 FOXL2NBQ6ZUU3 175 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 DTWD2Q8NBA8 298 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 TERB2Q8NHR7 220 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 ZNF799Q96GE5 643 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 PIGQQ9BRB3 760 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 CRLF2Q9HC73 371 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 BIN3Q9NQY0 253 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 ZNF581Q9P0T4 197 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 LRRC3CA6NJW4 275 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 SDCBPO00560 298 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-202ENST00000537230 MFNGO00587 321 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 AGPAT2O15120 278 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 DHRS3O75911 302 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 VAMP5O95183 116 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 CHRM2P08172 466 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 CSNK2A1P68400 391 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-202ENST00000537230 HIST1H3AP68431 136 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 NAAAQ02083 359 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 WIPI1Q5MNZ9 446 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-202ENST00000537230 HIST2H3PS2Q5TEC6 136 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 CLEC18BQ6UXF7 455 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 HIST2H3AQ71DI3 136 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 NRIP2Q9BQI9 281 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 SEC11CQ9BY50 192 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 RHOFQ9HBH0 211 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 LPAR3Q9UBY5 353 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 NBEAQ8NFP9 2946 aa11.23□□□□□ -0.61
TRIM25-202ENST00000537230 CXCL13O43927 109 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 FCGR2AP12318 317 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 B4GALT1P15291 398 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 ECH1Q13011 328 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 ZNF774Q6NX45 483 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 C20orf196Q8IYI0 205 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 OR51T1Q8NGJ9 327 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 OR10C1Q96KK4 312 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 NECAB3Q96P71 396 aaPredicted RBP11.22□□□□□ -0.61
TRIM25-202ENST00000537230 ST6GALNAC5Q9BVH7 336 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 PADI1Q9ULC6 663 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 FLVCR1Q9Y5Y0 555 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 EP300Q09472 2414 aaPredicted RBP11.22□□□□□ -0.61
TRIM25-202ENST00000537230 ZNHIT1O43257 154 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 TRAPPC6AO75865 159 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 PRF1P14222 555 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 GSK3AP49840 483 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 RBM39Q14498 530 aaKnown RBP11.22□□□□□ -0.61
TRIM25-202ENST00000537230 PNLIPRP3Q17RR3 467 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 ANKRD55Q3KP44 614 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 AKIRIN2Q53H80 203 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 AVPI1Q5T686 147 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 FOXRED2Q8IWF2 684 aa11.22□□□□□ -0.61
TRIM25-202ENST00000537230 CT55Q8WUE5 264 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms