RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.88□□□□□ -0.67
PRKDC-206ENST00000536429 POC1AQ8NBT0 407 aa10.88□□□□□ -0.67
PRKDC-206ENST00000536429 ZNF671Q8TAW3 534 aa10.88□□□□□ -0.67
PRKDC-206ENST00000536429 ADI1Q9BV57 179 aa10.88□□□□□ -0.67
PRKDC-206ENST00000536429 CHST5Q9GZS9 411 aa10.88□□□□□ -0.67
PRKDC-206ENST00000536429 PLEKHA1Q9HB21 404 aa10.88□□□□□ -0.67
PRKDC-206ENST00000536429 ELL3Q9HB65 397 aaPredicted RBP10.88□□□□□ -0.67
PRKDC-206ENST00000536429 RPL36Q9Y3U8 105 aaKnown RBP10.88□□□□□ -0.67
PRKDC-206ENST00000536429 ERICH4A6NGS2 130 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ZNF879B4DU55 563 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 F8VVB4 439 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 F8VWA3 439 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 SIGLEC5O15389 551 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ISG15P05161 165 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 LIMS3P0CW19 117 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 LIMS4P0CW20 117 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 PPIAL4GP0DN37 164 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 MPZP25189 248 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 GABRA2P47869 451 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 CEBPDP49716 269 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-206ENST00000536429 GTF2A1P52655 376 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ARF6P62330 175 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ACTA2P62736 377 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ACTG2P63267 376 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 PRB3Q04118 309 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-206ENST00000536429 GABPB1Q06547 395 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ALKBH1Q13686 389 aaKnown RBP10.87□□□□□ -0.67
PRKDC-206ENST00000536429 TMEM244Q5VVB8 128 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 TTC23Q5W5X9 447 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 RUSC1-AS1Q66K80 236 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 LAIR2Q6ISS4 152 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ACP7Q6ZNF0 438 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 SLC36A1Q7Z2H8 476 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 RNF144BQ7Z419 303 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ZNF573Q86YE8 665 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 SYS1Q8N2H4 156 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 DHRSXQ8N5I4 330 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 CD177Q8N6Q3 437 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ZDHHC22Q8N966 263 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 SPATA3Q8NHX4 192 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 ZNF418Q8TF45 676 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-206ENST00000536429 TMIGD2Q96BF3 282 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 FGGYQ96C11 551 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 NRIP2Q9BQI9 281 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 PCGF1Q9BSM1 259 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 FGF20Q9NP95 211 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-206ENST00000536429 INPP5EQ9NRR6 644 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
PRKDC-206ENST00000536429 MAB21L2Q9Y586 359 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 DOCK11Q5JSL3 2073 aa10.87□□□□□ -0.67
PRKDC-206ENST00000536429 MDFIC2A0A1B0GVS7 189 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 NKX6-3A6NJ46 265 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 RFPL4AA6NLU0 287 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 RFPL4AL1F8VTS6 287 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 NDUFB3O43676 98 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 NOS1APO75052 506 aaPredicted RBP10.86□□□□□ -0.67
PRKDC-206ENST00000536429 INMTO95050 263 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 PLATP00750 562 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 ACAA1P09110 424 aaPredicted RBP10.86□□□□□ -0.67
PRKDC-206ENST00000536429 ETV1P50549 477 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 CCR9P51686 369 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 DLX1P56177 255 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 SCGB2A2Q13296 93 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 KLHL22Q53GT1 634 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 OR2G6Q5TZ20 316 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 XAF1Q6GPH4 301 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 BRD3OSQ6XYD6 125 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 USP43Q70EL4 1123 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 ZNRF1Q8ND25 227 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 LY6G5BQ8NDX9 201 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 CCDC54Q8NEL0 328 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 C1orf147Q96MC9 270 aaPredicted RBP10.86□□□□□ -0.67
PRKDC-206ENST00000536429 WDFY2Q96P53 400 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 DUX5Q96PT3 197 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 PDCD1LG2Q9BQ51 273 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 JAM3Q9BX67 310 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 SUCNR1Q9BXA5 334 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 SIRPDQ9H106 197 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 DNTTIP1Q9H147 329 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 C8orf4Q9NR00 106 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 CLEC2DQ9UHP7 191 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 SLC7A11Q9UPY5 501 aa10.86□□□□□ -0.67
PRKDC-206ENST00000536429 A0A0A6YYJ9 748 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 GATBO75879 557 aaKnown RBP10.85□□□□□ -0.67
PRKDC-206ENST00000536429 TOX4O94842 621 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 ZFPL1O95159 310 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 FPR2P25090 351 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 CAPGP40121 348 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 FUT6P51993 359 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 ERVK11-1P61568 191 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 IL13RA1P78552 427 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 LRRC10Q5BKY1 277 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 ZNF676Q8N7Q3 588 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 PNLDC1Q8NA58 520 aaKnown RBP10.85□□□□□ -0.67
PRKDC-206ENST00000536429 OR13C3Q8NGS6 347 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 NRG4Q8WWG1 115 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 H1FXQ92522 213 aaKnown RBP10.85□□□□□ -0.67
PRKDC-206ENST00000536429 RGP1Q92546 391 aaPredicted RBP10.85□□□□□ -0.67
PRKDC-206ENST00000536429 SLAMF9Q96A28 289 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 C10orf35Q96D05 121 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms