RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ZAR1LA6NP61 321 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 H0YAE9 185 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 HAAOP46952 286 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 ACSM1Q08AH1 577 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 C12orf73Q69YU5 71 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 DHRS7BQ6IAN0 325 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 ACP7Q6ZNF0 438 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 ELMOD2Q8IZ81 293 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 FAM185AQ8N0U4 392 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 POC1AQ8NBT0 407 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 OR5D13Q8NGL4 314 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 LINC01006Q8NI28 216 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 SDSLQ96GA7 329 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 CITED1Q99966 193 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 VPREB3Q9UKI3 123 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 OR52A1Q9UKL2 312 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 POLDIP2Q9Y2S7 368 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 SF3B6Q9Y3B4 125 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 MAB21L2Q9Y586 359 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 SNX5Q9Y5X3 404 aa13.26□□□□□ -0.29
CLSTN3-204ENST00000535313 RFPL4AA6NLU0 287 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 RFPL4AL1F8VTS6 287 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 J3QT63 122 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 DLGAP1O14490 977 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 MAGEB4O15481 346 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 SRSF10O75494 262 aaKnown RBP13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 FCGR1AP12314 374 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 EPHA2P29317 976 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 SAA4P35542 130 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 EFNB1P98172 346 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 TAF9Q16594 264 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 C1orf146Q5VVC0 180 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 KDM4DQ6B0I6 523 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 PLEKHG7Q6ZR37 379 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 ZSCAN4Q8NAM6 433 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 OR51G2Q8NGK0 314 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 OR5R1Q8NH85 324 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 GABARAPL1Q9H0R8 117 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 GPR173Q9NS66 373 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 MRM2Q9UI43 246 aaKnown RBP13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 AP4S1Q9Y587 144 aa13.25□□□□□ -0.29
CLSTN3-204ENST00000535313 A0A1W2PPH5 198 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 DHRS7CA6NNS2 312 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 M0QZ24 198 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 SLC1A7O00341 560 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 TIMM23O14925 209 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 NXPH2O95156 264 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 KRT8P05787 483 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 PGA5P0DJD9 388 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 TMEM42Q69YG0 159 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 AMIGO2Q86SJ2 522 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 PNKDQ8N490 385 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 ZNF561Q8N587 486 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 ZNF488Q96MN9 340 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 WARS2Q9UGM6 360 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 V9GYS6 101 aa13.24□□□□□ -0.29
CLSTN3-204ENST00000535313 WNK1Q9H4A3 2382 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 PQLC2LA1A4F0 135 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 KCNAB3O43448 404 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 SYNGR1O43759 233 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 ANGPTL7O43827 346 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 NOS1APO75052 506 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 CLPXO76031 633 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 RPP14O95059 124 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 PRDX2P32119 198 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 TGFBR2P37173 567 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 RPL31P62899 125 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 Q6ZSV7 163 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 CD177Q8N6Q3 437 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 YIPF7Q8N8F6 280 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 OR14K1Q8NGZ2 314 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 TBX5Q99593 518 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 C19orf12Q9NSK7 152 aa13.23□□□□□ -0.29
CLSTN3-204ENST00000535313 A0A1B0GTI1 187 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 hCG_1809904A0A1W2PP81 198 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 A0A1W2PPE2 198 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 A0A1W2PR64 198 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 A0A1W2PRV1 198 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 ANKRD61A6NGH8 418 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 A6NIN4 97 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 OR2T7P0C7T2 308 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 HTR1FP30939 366 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 ATP6V1E1P36543 226 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 PROK1P58294 105 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 OCLNQ16625 522 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 MIDNQ504T8 468 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 BEND2Q8NDZ0 799 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 OR2T27Q8NH04 317 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 CIB1Q99828 191 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 NRIP2Q9BQI9 281 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 FAM234AQ9H0X4 552 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 C16orf95Q9H693 158 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 PLEKHA1Q9HB21 404 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 TCF7L1Q9HCS4 588 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 SLC7A11Q9UPY5 501 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 SLC22A13Q9Y226 551 aa13.22□□□□□ -0.29
CLSTN3-204ENST00000535313 A0A1W2PQL4 384 aaPredicted RBP13.21□□□□□ -0.29
CLSTN3-204ENST00000535313 MPZP25189 248 aa13.21□□□□□ -0.29
CLSTN3-204ENST00000535313 KRTAP10-3P60369 221 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms