RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ZNF319Q9P2F9 582 aa6.45□□□□□ -1.38
CLIP1-206ENST00000535290 DPM3Q9P2X0 92 aa6.45□□□□□ -1.38
CLIP1-206ENST00000535290 KMT2AQ03164 3969 aa6.45□□□□□ -1.38
CLIP1-206ENST00000535290 SLC1A7O00341 560 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 CCRL2O00421 344 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 MMP23AO75900 390 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 TK1P04183 234 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 IFNA6P05013 189 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 ACKR3P25106 362 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 CNTFRP26992 372 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 GPM6AP51674 278 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 STX1BP61266 288 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 TRAM2Q15035 370 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 GFOD2Q3B7J2 385 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 ASPHD1Q5U4P2 390 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 LYPD4Q6UWN0 246 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 BAIAP2L2Q6UXY1 529 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 DPY19L2P2Q6ZN68 376 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 ACP7Q6ZNF0 438 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 MBOAT2Q6ZWT7 520 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 ZBTB46Q86UZ6 589 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 ZNF429Q86V71 674 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 ZDHHC21Q8IVQ6 265 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 RNF113BQ8IZP6 322 aaKnown RBP6.44□□□□□ -1.38
CLIP1-206ENST00000535290 OFCC1Q8IZS5 231 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 STPG2Q8N412 459 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 DRAM1Q8N682 238 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 ZNF676Q8N7Q3 588 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 CSNK2A3Q8NEV1 391 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 OR4K13Q8NH42 304 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 LZICQ8WZA0 190 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 FAM46AQ96IP4 442 aaKnown RBP6.44□□□□□ -1.38
CLIP1-206ENST00000535290 ZNF488Q96MN9 340 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 OR8B4Q96RC9 309 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 PAIP2Q9BPZ3 127 aaKnown RBP6.44□□□□□ -1.38
CLIP1-206ENST00000535290 CLEC7AQ9BXN2 247 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 NDEL1Q9GZM8 345 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 RETNQ9HD89 108 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 PAPOLBQ9NRJ5 636 aaKnown RBP6.44□□□□□ -1.38
CLIP1-206ENST00000535290 CENPMQ9NSP4 180 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 MOB4Q9Y3A3 225 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 MPC1Q9Y5U8 109 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 SIRT4Q9Y6E7 314 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-206ENST00000535290 SESN1Q9Y6P5 492 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 HSPE1-MOB4S4R3N1 261 aa6.44□□□□□ -1.38
CLIP1-206ENST00000535290 HECTD4Q9Y4D8 3996 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 OR6C68A6NDL8 312 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 TVP23AA6NH52 213 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 A8MZ25 164 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 H3BSH0 61 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 DEDDO75618 318 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 DNAJC8O75937 253 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-206ENST00000535290 CST4P01036 141 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 ANXA2P07355 339 aaKnown RBP6.43□□□□□ -1.38
CLIP1-206ENST00000535290 POU3F4P49335 361 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 RPS6KA3P51812 740 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 IFFO1Q0D2I5 559 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 TAF13Q15543 124 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 PNLIPRP3Q17RR3 467 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 AGKQ53H12 422 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 CXorf66Q5JRM2 361 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-206ENST00000535290 NANOGP8Q6NSW7 305 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 FAM57BQ71RH2 274 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 CBLL1Q75N03 491 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 PRSS45Q7RTY3 260 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 DCXRQ7Z4W1 244 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 SLC35E3Q7Z769 313 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 FAM71E2Q8N5Q1 922 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 C5orf56Q8N8D9 126 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 EIF1ADQ8N9N8 165 aaKnown RBP6.43□□□□□ -1.38
CLIP1-206ENST00000535290 OR4C15Q8NGM1 316 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 ZNF671Q8TAW3 534 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 C4orf3Q8WVX3 66 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 ZNRF4Q8WWF5 429 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 AQP3Q92482 292 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 PIGCQ92535 297 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 ST6GALNAC6Q969X2 333 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 SLAMF6Q96DU3 332 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 C16orf45Q96MC5 204 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-206ENST00000535290 ZNF714Q96N38 554 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 ERMAPQ96PL5 475 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-206ENST00000535290 FNDC11Q9BVV2 318 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 TMEM133Q9H2Q1 129 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 RASL12Q9NYN1 266 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 KCNG2Q9UJ96 466 aa6.43□□□□□ -1.38
CLIP1-206ENST00000535290 ZNF732B4DXR9 585 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 K7N7A8 449 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 SAP30O75446 220 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 RENP00797 406 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 IGHG2P01859 326 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 HIST1H1CP16403 213 aaKnown RBP6.42□□□□□ -1.38
CLIP1-206ENST00000535290 FSTP19883 344 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 PYCR1P32322 319 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 IFNA8P32881 189 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 CX3CR1P49238 355 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 EDDM3BP56851 147 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 BDH1Q02338 343 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 FOXE3Q13461 319 aa6.42□□□□□ -1.38
CLIP1-206ENST00000535290 EIF2B1Q14232 305 aaKnown RBP6.42□□□□□ -1.38
CLIP1-206ENST00000535290 SMIM21Q3B7S5 101 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms