RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 TNFSF4P23510 183 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 CRABP1P29762 137 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 C21orf33P30042 268 aaPredicted RBP7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 SLC6A6P31641 620 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 VEGFCP49767 419 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 ARHGDIBP52566 201 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 LSM6P62312 80 aaKnown RBP7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 SLC3A1Q07837 685 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 ST3GAL4Q11206 333 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 ZMYND11Q15326 602 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 SSX1Q16384 188 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 MEP1BQ16820 701 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 LGALSLQ3ZCW2 172 aaPredicted RBP7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 PLA1AQ53H76 456 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 HES5Q5TA89 166 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 MZT2AQ6P582 158 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 LEG1Q6P5S2 330 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 UTS2BQ765I0 119 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 RHOUQ7L0Q8 258 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 PEG10Q86TG7 708 aaKnown RBP7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 Q8N402 240 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 DMBX1Q8NFW5 382 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 OR2Z1Q8NG97 314 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 OR4K13Q8NH42 304 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 OR1F12Q8NHA8 337 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 ACOT12Q8WYK0 555 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 UPRTQ96BW1 309 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 CMBLQ96DG6 245 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 TSSK2Q96PF2 358 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 RBM14Q96PK6 669 aaKnown RBP7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 NMNAT3Q96T66 252 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 DPCDQ9BVM2 203 aaPredicted RBP7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 IFT27Q9BW83 186 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 ABCB9Q9NP78 766 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 BABAM2Q9NXR7 383 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 LSM2Q9Y333 95 aaKnown RBP7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 STARD10Q9Y365 291 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 NUBP2Q9Y5Y2 271 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 ATRQ13535 2644 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 LOC105371242A0A075B767 164 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 A0A1W2PQL4 384 aaPredicted RBP7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 OR6C6A6NF89 314 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 DCTN6O00399 190 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 PRKYO43930 277 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 RGS9O75916 674 aaPredicted RBP7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 MPC2O95563 127 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 HIST1H1CP16403 213 aaKnown RBP7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 SPI1P17947 270 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 KITLGP21583 273 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 TUBG1P23258 451 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 FPR3P25089 353 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 NOS3P29474 1203 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 RBMXP38159 391 aaKnown RBP7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 IFNGR2P38484 337 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 FCN2Q15485 313 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 KCNMB1Q16558 191 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 OR5AS1Q8N127 324 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 OR6V1Q8N148 313 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 SDR9C7Q8NEX9 313 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 PROKR2Q8NFJ6 384 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 GJC3Q8NFK1 279 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 OR8D4Q8NGM9 314 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 GNPDA2Q8TDQ7 276 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 SCARB1Q8WTV0 552 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 ITLN1Q8WWA0 313 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 ASB13Q8WXK3 278 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 SAMD8Q96LT4 415 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 SEC22CQ9BRL7 303 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 PDCD10Q9BUL8 212 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 OR51M1Q9H341 326 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 OR51J1Q9H342 316 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 SRA1Q9HD15 236 aaKnown RBP7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 G6PC2Q9NQR9 355 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 TUBG2Q9NRH3 451 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 CLN6Q9NWW5 311 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 VNN3Q9NY84 501 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 PDP1Q9P0J1 537 aaPredicted RBP7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 MLXQ9UH92 298 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 B9D1Q9UPM9 204 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 LHFPL6Q9Y693 200 aa7.22□□□□□ -1.25
SFSWAP-202ENST00000535202 SVEP1Q4LDE5 3571 aa7.21□□□□□ -1.25
SFSWAP-202ENST00000535202 COL6A5A8TX70 2615 aa7.21□□□□□ -1.25
SFSWAP-202ENST00000535202 IGLV1-36A0A0B4J1U3 117 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 IRGMA1A4Y4 181 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 LINC00587B1AMM8 73 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 SULT1C2O00338 296 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 ARPC3O15145 178 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 PRAF2O60831 178 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 HLA-DQA2P01906 255 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 S100A9P06702 114 aaKnown RBP7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 NMBP08949 121 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 SBK2P0C263 348 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 TNFRSF1AP19438 455 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 GALP22466 123 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 AZGP1P25311 298 aaKnown RBP7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 MAPK3P27361 379 aaPredicted RBP7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 FGF9P31371 208 aaPredicted RBP7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 INPP1P49441 399 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 CDC42P60953 191 aa7.21□□□□□ -1.26
SFSWAP-202ENST00000535202 SNRPGP62308 76 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms