RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	OR2AT4	A6NND4	320 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	NDUFB3	O43676	98 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	SYNGR1	O43759	233 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	NOS1AP	O75052	506 aa	Predicted RBP	12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	ECD	O95905	644 aa	Predicted RBP	12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	RPSA	P08865	295 aa	Known RBP	12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	CCDC159	P0C7I6	412 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	DUX4L2	P0CJ85	424 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	DUX4L3	P0CJ86	424 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	DUX4L4	P0CJ87	422 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	DUX4L5	P0CJ88	424 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	DUX4L6	P0CJ89	424 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	DUX4L7	P0CJ90	424 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	PGA5	P0DJD9	388 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	ZNF20	P17024	532 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	MPZ	P25189	248 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	CNN3	Q15417	329 aa	Known RBP	12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	ARMCX4	Q5H9R4	360 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	DUX4L9	Q6RFH8	374 aa	Predicted RBP	12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	TMPRSS11A	Q6ZMR5	421 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	ZNF788	Q6ZQV5	615 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	UTS2B	Q765I0	119 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	BTN2A1	Q7KYR7	527 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	ANGPTL5	Q86XS5	388 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	FAM216B	Q8N7L0	139 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	OR51A4	Q8NGJ6	313 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	OR10AC1	Q8NH08	325 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	OR5AK2	Q8NH90	309 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	NPRL2	Q8WTW4	380 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	FBLIM1	Q8WUP2	373 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	NRG4	Q8WWG1	115 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	ST8SIA4	Q92187	359 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	GGH	Q92820	318 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	TMEM80	Q96HE8	168 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	PKIB	Q9C010	78 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	COMMD4	Q9H0A8	199 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	DUX4	Q9UBX2	424 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	MXRA5	Q9NR99	2828 aa		12.04	□□□□□ -0.48
CTSB-231	ENST00000534382	IGKV1D-17	A0A075B6S4	117 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	EFCAB10	A6NFE3	127 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	NKX6-3	A6NJ46	265 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382		H0YJX3	145 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	GPR37	O15354	613 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	TCF21	O43680	179 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	ZFPL1	O95159	310 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	ACAA1	P09110	424 aa	Predicted RBP	12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	PSG2	P11465	335 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	ATF1	P18846	271 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	MYL12A	P19105	171 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	GABRA2	P47869	451 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	IL13RA1	P78552	427 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	IL24	Q13007	206 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	IKZF1	Q13422	519 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	MED21	Q13503	144 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	LRRC10	Q5BKY1	277 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	KLF17	Q5JT82	389 aa	Predicted RBP	12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	LAIR2	Q6ISS4	152 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	ACP7	Q6ZNF0	438 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	CALHM1	Q8IU99	346 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	PNLDC1	Q8NA58	520 aa	Known RBP	12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	DNAAF1	Q8NEP3	725 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	OR13C3	Q8NGS6	347 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	TMEM158	Q8WZ71	300 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	UPRT	Q96BW1	309 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	BORCS8	Q96FH0	119 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	ZNF488	Q96MN9	340 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	GAFA1	Q96PS6	74 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	PDCD1LG2	Q9BQ51	273 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	NRIP2	Q9BQI9	281 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	CHCHD3	Q9NX63	227 aa	Known RBP	12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	NUP50	Q9UKX7	468 aa		12.03	□□□□□ -0.48
CTSB-231	ENST00000534382	IGKV1-27	A0A075B6S5	117 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382		A0A0A6YYJ9	748 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	IGKV1-9	A0A0C4DH69	117 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	TRBV2	A0A0J9YWF9	115 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382		H0YHG0	523 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	SIGLEC5	O15389	551 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	TFF1	P04155	84 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	PIP	P12273	146 aa	Predicted RBP	12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	PRKACB	P22694	351 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	FPR2	P25090	351 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	RBP2	P50120	134 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	GTF2A1	P52655	376 aa	Predicted RBP	12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	FGF12	P61328	243 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	ST3GAL4	Q11206	333 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	SMIM21	Q3B7S5	101 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	CCDC58	Q4VC31	144 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	OR2G6	Q5TZ20	316 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	FGFRL1	Q8N441	504 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	ZNF418	Q8TF45	676 aa	Predicted RBP	12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	PLCXD1	Q9NUJ7	323 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	BABAM2	Q9NXR7	383 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	CNOT2	Q9NZN8	540 aa	Known RBP	12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	CLEC2D	Q9UHP7	191 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	PSORS1C1	Q9UIG5	152 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	RPUSD1	Q9UJJ7	312 aa	Known RBP	12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	ZNF222	Q9UK12	451 aa		12.02	□□□□□ -0.49
CTSB-231	ENST00000534382	RFPL4A	A6NLU0	287 aa		12.01	□□□□□ -0.49
CTSB-231	ENST00000534382	RNF212B	A8MTL3	300 aa		12.01	□□□□□ -0.49

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