RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 TBPP20226 339 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 CMPK1P30085 196 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 RPA3P35244 121 aaPredicted RBP3.92□□□□□ -1.78
CASP4-213ENST00000534356 ZNF136P52737 540 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 ATP1B3P54709 279 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 EIF3EP60228 445 aaKnown RBP3.92□□□□□ -1.78
CASP4-213ENST00000534356 CDK16Q00536 496 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 REG3AQ06141 175 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 PRDX1Q06830 199 aaKnown RBP3.92□□□□□ -1.78
CASP4-213ENST00000534356 PDIA2Q13087 525 aaKnown RBP3.92□□□□□ -1.78
CASP4-213ENST00000534356 MADCAM1Q13477 382 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 OR5I1Q13606 314 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 TFDP2Q14188 446 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 EBI3Q14213 229 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 ITIH4Q14624 930 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 FILIP1LQ4L180 1135 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 LRRC10Q5BKY1 277 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 SASS6Q6UVJ0 657 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 CYHR1Q6ZMK1 362 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 DHDDSQ86SQ9 333 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 APCDD1LQ8NCL9 501 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 OR5D13Q8NGL4 314 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 RAD51AP1Q96B01 352 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 BIRC8Q96P09 236 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 PELOQ9BRX2 385 aaKnown RBP3.92□□□□□ -1.78
CASP4-213ENST00000534356 TMEM43Q9BTV4 400 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 TTTY12Q9BZ98 90 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 TRIM45Q9H8W5 580 aaPredicted RBP3.92□□□□□ -1.78
CASP4-213ENST00000534356 VPS37BQ9H9H4 285 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 PROK2Q9HC23 129 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 CHRAC1Q9NRG0 131 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 GIN1Q9NXP7 522 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 SVEP1Q4LDE5 3571 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 MALRD1Q5VYJ5 2156 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 CADP27708 2225 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 C15orf38-AP3S2A0A0A6YYH1 394 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 HACD1B0YJ81 288 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 SPOPO43791 374 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 ICOSLGO75144 302 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 OR2J2O76002 312 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 MYO1DO94832 1006 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 SNX4O95219 450 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 NSA2O95478 260 aaKnown RBP3.91□□□□□ -1.78
CASP4-213ENST00000534356 CCL3P10147 92 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 ERGP11308 486 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 SLCO1A2P46721 670 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 RAB8AP61006 207 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 PLGLB1Q02325 96 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 ACVR1Q04771 509 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 IL24Q13007 206 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 FAM53BQ14153 422 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 PRPSAP1Q14558 356 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 PDK3Q15120 406 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 DEFB134Q4QY38 66 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 C1orf185Q5T7R7 199 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 PTRHD1Q6GMV3 140 aaKnown RBP3.91□□□□□ -1.78
CASP4-213ENST00000534356 C6orf120Q7Z4R8 191 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 CYP4Z2PQ8N1L4 340 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 OR8K1Q8NGG5 319 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 FAM110BQ8TC76 370 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 ASZ1Q8WWH4 475 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 RERGQ96A58 199 aaPredicted RBP3.91□□□□□ -1.78
CASP4-213ENST00000534356 VAT1Q99536 393 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 IFNKQ9P0W0 207 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 KCNIP3Q9Y2W7 256 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 KLF13Q9Y2Y9 288 aaPredicted RBP3.91□□□□□ -1.78
CASP4-213ENST00000534356 DYSFO75923 2080 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 ANK2Q01484 3957 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 TGP01266 2768 aa3.91□□□□□ -1.78
CASP4-213ENST00000534356 IGKV3D-11A0A0A0MRZ8 115 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 OR5B21A6NL26 309 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 C12orf71A8MTZ7 269 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 KLRC4-KLRK1H3BQV0 150 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 APOC4-APOC2K7ER74 178 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 PRMT5O14744 637 aaPredicted RBP3.9□□□□□ -1.79
CASP4-213ENST00000534356 NBR2O15453 112 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 ZNF208O43345 1280 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 APOC2P02655 101 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 SERPIND1P05546 499 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 DBTP11182 482 aaKnown RBP3.9□□□□□ -1.79
CASP4-213ENST00000534356 IMPA1P29218 277 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 MAGEA8P43361 318 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 NMUP48645 174 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 SUCLG1P53597 346 aaKnown RBP3.9□□□□□ -1.79
CASP4-213ENST00000534356 LRRC74AQ0VAA2 488 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 TSPO2Q5TGU0 170 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 PRAMEF20Q5VT98 475 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 DGAT2L6Q6ZPD8 337 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 KATNAL2Q8IYT4 538 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 TMEM156Q8N614 296 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 FNDC5Q8NAU1 212 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 DUSP18Q8NEJ0 188 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 OR4F15Q8NGB8 312 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 RNASE6Q93091 150 aaKnown RBP3.9□□□□□ -1.79
CASP4-213ENST00000534356 OR4K3Q96R72 315 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 EXO5Q9H790 373 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 ANKHQ9HCJ1 492 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 EXTL2Q9UBQ6 330 aa3.9□□□□□ -1.79
CASP4-213ENST00000534356 PACSIN2Q9UNF0 486 aaPredicted RBP3.9□□□□□ -1.79
CASP4-213ENST00000534356 BZW2Q9Y6E2 419 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms